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CIAO2A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.0 nTPM
HPA:22.0 nTPM
GTEx:22.9 nTPM
FANTOM5:42.1 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:35.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040459
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Hippocampus
nTPM: 22.0
1898 Male, age 80, left hemisphere 23.5
2529 Female, age 94, left hemisphere 22.9
1855 Male, age 76, left hemisphere 22.3
1911 Female, age 85, right hemisphere 22.1
2621 Female, age 67, right hemisphere 20.7
2148 Female, age 91, left hemisphere 20.3
Dentate gyrus
nTPM: 20.9
2010 Male, age 76, both hemispheres 22.0
2530 Female, age 94, left hemisphere 21.5
2246 Female, age 85, both hemispheres 21.4
2528 Male, age 74, both hemispheres 21.1
1927 Female, age 91, both hemispheres 20.2
2531 Female, age 67, both hemispheres 19.0
Entorhinal gyrus
nTPM: 21.4
2117 Female, age 91, right hemisphere 23.9
1787 Male, age 76, left hemisphere 22.1
2764 Male, age 80, right hemisphere 21.8
1938 Female, age 85, left hemisphere 21.0
2613 Female, age 94, left hemisphere 19.9
2686 Male, age 75, right hemisphere 19.5
Hippocampus, CA1
nTPM: 20.9
2527 Male, age 74, both hemispheres 22.5
2082 Female, age 91, right hemisphere 21.1
2749 Male, age 80, left hemisphere 20.6
1873 Female, age 85, both hemispheres 20.2
2045 Male, age 76, both hemispheres 20.0
Hippocampus, CA2
nTPM: 21.3
2249 Male, age 74, both hemispheres 23.0
1940 Female, age 85, left hemisphere 21.9
1963 Male, age 80, left hemisphere 21.5
2437 Female, age 94, left hemisphere 21.0
1892 Male, age 76, both hemispheres 20.5
2113 Female, age 91, right hemisphere 20.1
Hippocampus, CA3
nTPM: 21.0
2436 Male, age 74, both hemispheres 27.6
1891 Female, age 85, both hemispheres 21.7
1867 Male, age 76, both hemispheres 21.6
2137 Male, age 80, left hemisphere 20.2
2620 Female, age 94, left hemisphere 17.8
2861 Female, age 67, both hemispheres 16.8
Parahippocampal cortex
nTPM: 20.5
2018 Male, age 76, both hemispheres 22.1
1990 Female, age 91, right hemisphere 21.7
2250 Female, age 67, right hemisphere 21.4
2245 Female, age 91, both hemispheres 20.5
1933 Female, age 85, both hemispheres 20.4
2692 Male, age 74, both hemispheres 20.4
1850 Male, age 80, both hemispheres 20.1
2532 Female, age 72, left hemisphere 19.8
2693 Female, age 94, both hemispheres 19.7
2622 Female, age 67, right hemisphere 19.4
Perirhinal gyrus
nTPM: 20.1
1841 Female, age 85, right hemisphere 20.3
1847 Female, age 91, left hemisphere 20.2
1794 Male, age 80, right hemisphere 20.1
2848 Male, age 76, right hemisphere 20.0
2521 Female, age 94, right hemisphere 19.8
Subiculum
nTPM: 20.4
2042 Male, age 76, both hemispheres 22.0
1901 Male, age 80, both hemispheres 21.6
2729 Female, age 91, right hemisphere 21.3
1977 Female, age 85, both hemispheres 21.0
2619 Male, age 74, both hemispheres 19.2
2438 Female, age 94, left hemisphere 17.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.9
Samples: 197

Max nTPM: 43.0
Min nTPM: 11.7
Std nTPM: 5.5
Median nTPM: 22.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 38.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 38.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 37.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 34.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 34.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 34.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 33.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 33.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 33.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 33.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.1
FF:10153-102I9 76 years, female 48.7
FF:10169-103B7 60 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 30.9
Min nTPM: 12.4
Sample A Female 30.9
Sample B Female 20.7
Sample C Male 25.4
Sample D Male 12.4
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 23.5
Min nTPM: 13.1
Sample A Female 15.8
Sample B Female 23.5
Sample C Male 17.6
Sample D Male 13.1
Subiculum
nTPM: 17.9
Samples: 4

Max nTPM: 22.6
Min nTPM: 14.4
Sample A Female 22.6
Sample B Female 17.9
Sample C Male 14.4
Sample D Male 16.8
Ventral hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 21.5
Min nTPM: 17.1
Sample A Female 19.3
Sample B Female 17.1
Sample C Male 17.3
Sample D Male 21.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.5
Samples: 4

Max nTPM: 35.5
Min nTPM: 29.3
Sample A Male 31.0
Sample B Male 30.1
Sample C Female 35.5
Sample D Female 29.3
Hippocampal formation
nTPM: 35.3
Samples: 4

Max nTPM: 41.3
Min nTPM: 31.2
Sample A Male 41.3
Sample B Male 31.5
Sample C Female 31.2
Sample D Female 37.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
77904919 Antisense, RP_070208_04_D09, Mouse strain C57BL/6J (56 days, male) 0.0

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