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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:20.1 nTPM
HPA:20.1 nTPM
GTEx:22.4 nTPM
FANTOM5:11.9 Scaled Tags Per Million
Pig:4.4 nTPM
Mouse:10.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021335Antibody HPA021830
Glial cells MediumLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.1
Sample id Sample description nTPM
Hippocampus
nTPM: 18.2
1898 Male, age 80, left hemisphere 20.6
2529 Female, age 94, left hemisphere 19.4
2148 Female, age 91, left hemisphere 18.8
1911 Female, age 85, right hemisphere 17.2
2621 Female, age 67, right hemisphere 17.1
1855 Male, age 76, left hemisphere 16.1
Dentate gyrus
nTPM: 18.9
2530 Female, age 94, left hemisphere 22.6
2528 Male, age 74, both hemispheres 20.9
2010 Male, age 76, both hemispheres 18.7
1927 Female, age 91, both hemispheres 17.8
2246 Female, age 85, both hemispheres 17.1
2531 Female, age 67, both hemispheres 16.3
Entorhinal gyrus
nTPM: 19.9
2764 Male, age 80, right hemisphere 23.6
2117 Female, age 91, right hemisphere 21.6
1787 Male, age 76, left hemisphere 20.0
1938 Female, age 85, left hemisphere 19.4
2613 Female, age 94, left hemisphere 18.9
2686 Male, age 75, right hemisphere 15.6
Hippocampus, CA1
nTPM: 18.9
2749 Male, age 80, left hemisphere 25.1
2527 Male, age 74, both hemispheres 20.3
2082 Female, age 91, right hemisphere 18.6
1873 Female, age 85, both hemispheres 16.7
2045 Male, age 76, both hemispheres 13.8
Hippocampus, CA2
nTPM: 20.1
2249 Male, age 74, both hemispheres 24.5
1963 Male, age 80, left hemisphere 21.6
2437 Female, age 94, left hemisphere 20.0
2113 Female, age 91, right hemisphere 18.5
1892 Male, age 76, both hemispheres 18.4
1940 Female, age 85, left hemisphere 17.8
Hippocampus, CA3
nTPM: 18.3
2436 Male, age 74, both hemispheres 22.5
2137 Male, age 80, left hemisphere 20.3
1867 Male, age 76, both hemispheres 18.4
1891 Female, age 85, both hemispheres 17.3
2620 Female, age 94, left hemisphere 16.1
2861 Female, age 67, both hemispheres 15.2
Parahippocampal cortex
nTPM: 18.1
1990 Female, age 91, right hemisphere 20.1
2250 Female, age 67, right hemisphere 19.6
2245 Female, age 91, both hemispheres 19.3
1933 Female, age 85, both hemispheres 18.9
2532 Female, age 72, left hemisphere 18.5
2692 Male, age 74, both hemispheres 17.2
2018 Male, age 76, both hemispheres 17.1
2622 Female, age 67, right hemisphere 17.1
1850 Male, age 80, both hemispheres 16.8
2693 Female, age 94, both hemispheres 16.5
Perirhinal gyrus
nTPM: 18.9
1794 Male, age 80, right hemisphere 21.4
1847 Female, age 91, left hemisphere 19.2
2521 Female, age 94, right hemisphere 18.8
1841 Female, age 85, right hemisphere 17.8
2848 Male, age 76, right hemisphere 17.1
Subiculum
nTPM: 18.5
1977 Female, age 85, both hemispheres 22.2
2619 Male, age 74, both hemispheres 19.7
1901 Male, age 80, both hemispheres 19.5
2729 Female, age 91, right hemisphere 17.8
2438 Female, age 94, left hemisphere 17.1
2042 Male, age 76, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 49.4
Min nTPM: 6.5
Std nTPM: 7.4
Median nTPM: 21.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 49.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 40.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 39.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 38.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 38.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 37.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 36.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 35.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 35.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.9
FF:10153-102I9 76 years, female 12.3
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.6
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.6
Sample A Female 4.1
Sample B Female 3.5
Sample C Male 4.2
Sample D Male 2.6
Entorhinal cortex
nTPM: 3.5
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.0
Sample A Female 3.0
Sample B Female 4.0
Sample C Male 4.1
Sample D Male 3.0
Subiculum
nTPM: 3.9
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.5
Sample A Female 4.1
Sample B Female 3.5
Sample C Male 4.5
Sample D Male 3.5
Ventral hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 6.2
Min nTPM: 3.3
Sample A Female 3.5
Sample B Female 3.3
Sample C Male 6.2
Sample D Male 4.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 10.4
Min nTPM: 7.8
Sample A Male 8.7
Sample B Male 10.4
Sample C Female 7.8
Sample D Female 9.2
Hippocampal formation
nTPM: 10.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.5
Sample A Male 9.5
Sample B Male 9.7
Sample C Female 10.1
Sample D Female 13.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71992025 Antisense, RP_051012_04_A03, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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