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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		119.341
RNA expressioni
Consensus:23.6 nTPM
HPA:23.6 nTPM
GTEx:48.2 nTPM
FANTOM5:1.6 Scaled Tags Per Million
Pig:23.2 nTPM
Mouse:109.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030790Antibody HPA075862
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB078782
Hippocampal formation mean intensity 119.341
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 54.097
Molecular layer of the dentate gyrus 41.700
Granular dentate gyrus 88.695
CA1 - oriens layer 58.947
CA1 - pyramidal layer 105.376
CA1 - radiatum layer 58.683
CA2 - oriens layer 49.570
CA2 - pyramidal layer 88.177
CA2 - radiatum layer 42.534
CA3 - oriens layer 42.308
CA3 - pyramidal layer 87.500
CA3 - radiatum layer 41.208
Stratum lucidum 39.222
Lacunosum moleculare 26.533
Subiculum 74.423

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.6
Sample id Sample description nTPM
Hippocampus
nTPM: 3.2
2621 Female, age 67, right hemisphere 15.9
2148 Female, age 91, left hemisphere 3.6
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 11.6
2531 Female, age 67, both hemispheres 61.9
1927 Female, age 91, both hemispheres 8.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 18.7
2686 Male, age 75, right hemisphere 45.2
2613 Female, age 94, left hemisphere 38.4
2764 Male, age 80, right hemisphere 24.1
1787 Male, age 76, left hemisphere 4.7
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.8
2749 Male, age 80, left hemisphere 4.1
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 23.6
2861 Female, age 67, both hemispheres 79.2
2620 Female, age 94, left hemisphere 50.3
2137 Male, age 80, left hemisphere 12.4
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 17.2
2622 Female, age 67, right hemisphere 70.9
2532 Female, age 72, left hemisphere 25.9
2245 Female, age 91, both hemispheres 25.6
2692 Male, age 74, both hemispheres 22.3
1850 Male, age 80, both hemispheres 13.0
1990 Female, age 91, right hemisphere 9.0
2693 Female, age 94, both hemispheres 5.5
1933 Female, age 85, both hemispheres 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 2.7
1794 Male, age 80, right hemisphere 10.6
1847 Female, age 91, left hemisphere 2.8
1841 Female, age 85, right hemisphere 0.0
2521 Female, age 94, right hemisphere 0.0
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 0.3
2619 Male, age 74, both hemispheres 1.8
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.2
Samples: 197

Max nTPM: 134.5
Min nTPM: 0.5
Std nTPM: 29.1
Median nTPM: 45.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 134.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 128.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 116.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 111.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 108.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 107.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 104.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 99.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 98.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 98.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 97.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.6
FF:10153-102I9 76 years, female 3.2
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 19.6
Min nTPM: 10.9
Sample A Female 19.6
Sample B Female 16.6
Sample C Male 10.9
Sample D Male 15.1
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 26.8
Min nTPM: 20.0
Sample A Female 26.8
Sample B Female 22.4
Sample C Male 20.0
Sample D Male 23.7
Subiculum
nTPM: 13.4
Samples: 4

Max nTPM: 18.5
Min nTPM: 11.0
Sample A Female 18.5
Sample B Female 11.4
Sample C Male 11.0
Sample D Male 12.5
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 17.0
Min nTPM: 9.7
Sample A Female 13.2
Sample B Female 9.7
Sample C Male 14.5
Sample D Male 17.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.4
Samples: 4

Max nTPM: 126.2
Min nTPM: 95.4
Sample A Male 117.8
Sample B Male 126.2
Sample C Female 95.4
Sample D Female 98.2
Hippocampal formation
nTPM: 108.5
Samples: 4

Max nTPM: 120.6
Min nTPM: 96.9
Sample A Male 96.9
Sample B Male 120.6
Sample C Female 112.7
Sample D Female 103.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.