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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:16.8 nTPM
HPA:16.8 nTPM
GTEx:28.5 nTPM
FANTOM5:19.4 Scaled Tags Per Million
Pig:12.1 nTPM
Mouse:30.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028569
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.8
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
1898 Male, age 80, left hemisphere 17.8
2529 Female, age 94, left hemisphere 16.2
2621 Female, age 67, right hemisphere 15.1
1855 Male, age 76, left hemisphere 14.7
2148 Female, age 91, left hemisphere 14.2
1911 Female, age 85, right hemisphere 13.7
Dentate gyrus
nTPM: 15.0
2010 Male, age 76, both hemispheres 18.7
2528 Male, age 74, both hemispheres 16.3
2530 Female, age 94, left hemisphere 14.7
2531 Female, age 67, both hemispheres 13.5
2246 Female, age 85, both hemispheres 13.4
1927 Female, age 91, both hemispheres 13.2
Entorhinal gyrus
nTPM: 15.4
2764 Male, age 80, right hemisphere 19.2
2686 Male, age 75, right hemisphere 16.8
2613 Female, age 94, left hemisphere 15.8
1787 Male, age 76, left hemisphere 14.7
1938 Female, age 85, left hemisphere 13.7
2117 Female, age 91, right hemisphere 12.5
Hippocampus, CA1
nTPM: 16.8
2749 Male, age 80, left hemisphere 25.1
2045 Male, age 76, both hemispheres 16.3
2527 Male, age 74, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.0
1873 Female, age 85, both hemispheres 13.7
Hippocampus, CA2
nTPM: 14.4
1892 Male, age 76, both hemispheres 14.9
1963 Male, age 80, left hemisphere 14.8
1940 Female, age 85, left hemisphere 14.6
2249 Male, age 74, both hemispheres 14.5
2437 Female, age 94, left hemisphere 14.1
2113 Female, age 91, right hemisphere 13.3
Hippocampus, CA3
nTPM: 16.4
2137 Male, age 80, left hemisphere 20.5
1867 Male, age 76, both hemispheres 18.8
2620 Female, age 94, left hemisphere 18.3
2436 Male, age 74, both hemispheres 15.1
2861 Female, age 67, both hemispheres 12.9
1891 Female, age 85, both hemispheres 12.5
Parahippocampal cortex
nTPM: 15.3
2018 Male, age 76, both hemispheres 19.2
2245 Female, age 91, both hemispheres 17.8
1850 Male, age 80, both hemispheres 15.7
2532 Female, age 72, left hemisphere 15.7
1933 Female, age 85, both hemispheres 15.1
2693 Female, age 94, both hemispheres 15.1
2622 Female, age 67, right hemisphere 15.0
1990 Female, age 91, right hemisphere 14.5
2250 Female, age 67, right hemisphere 13.7
2692 Male, age 74, both hemispheres 11.5
Perirhinal gyrus
nTPM: 16.2
1847 Female, age 91, left hemisphere 19.1
1794 Male, age 80, right hemisphere 18.6
2521 Female, age 94, right hemisphere 17.7
1841 Female, age 85, right hemisphere 14.9
2848 Male, age 76, right hemisphere 10.5
Subiculum
nTPM: 14.7
1901 Male, age 80, both hemispheres 17.0
1977 Female, age 85, both hemispheres 15.6
2042 Male, age 76, both hemispheres 14.9
2438 Female, age 94, left hemisphere 14.2
2619 Male, age 74, both hemispheres 14.0
2729 Female, age 91, right hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.5
Samples: 197

Max nTPM: 72.0
Min nTPM: 11.2
Std nTPM: 8.1
Median nTPM: 27.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 72.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 59.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 56.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 51.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 47.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 44.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 43.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 43.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.4
FF:10153-102I9 76 years, female 22.0
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 15.4
Min nTPM: 8.3
Sample A Female 15.4
Sample B Female 12.5
Sample C Male 12.0
Sample D Male 8.3
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.0
Sample A Female 12.5
Sample B Female 12.3
Sample C Male 13.6
Sample D Male 10.0
Subiculum
nTPM: 11.9
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.5
Sample A Female 14.4
Sample B Female 10.5
Sample C Male 12.0
Sample D Male 10.7
Ventral hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 15.2
Min nTPM: 8.8
Sample A Female 11.1
Sample B Female 8.8
Sample C Male 15.2
Sample D Male 12.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 34.2
Min nTPM: 21.6
Sample A Male 29.0
Sample B Male 21.6
Sample C Female 34.2
Sample D Female 29.4
Hippocampal formation
nTPM: 30.1
Samples: 4

Max nTPM: 34.2
Min nTPM: 27.6
Sample A Male 27.8
Sample B Male 27.6
Sample C Female 30.7
Sample D Female 34.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70724661 Antisense, RP_050705_02_D05, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

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