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ATG16L2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:18.0 nTPM
HPA:18.0 nTPM
GTEx:13.9 nTPM
FANTOM5:8.0 Scaled Tags Per Million
Pig:2.9 nTPM
Mouse:2.6 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045444
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.0
Sample id Sample description nTPM
Hippocampus
nTPM: 16.6
2529 Female, age 94, left hemisphere 18.1
1855 Male, age 76, left hemisphere 17.6
2148 Female, age 91, left hemisphere 17.0
2621 Female, age 67, right hemisphere 16.3
1911 Female, age 85, right hemisphere 16.1
1898 Male, age 80, left hemisphere 14.5
Dentate gyrus
nTPM: 16.3
2531 Female, age 67, both hemispheres 17.8
2530 Female, age 94, left hemisphere 16.9
1927 Female, age 91, both hemispheres 16.3
2010 Male, age 76, both hemispheres 16.0
2246 Female, age 85, both hemispheres 15.8
2528 Male, age 74, both hemispheres 14.8
Entorhinal gyrus
nTPM: 18.0
2613 Female, age 94, left hemisphere 22.0
1787 Male, age 76, left hemisphere 18.4
1938 Female, age 85, left hemisphere 17.7
2764 Male, age 80, right hemisphere 17.1
2117 Female, age 91, right hemisphere 16.6
2686 Male, age 75, right hemisphere 16.4
Hippocampus, CA1
nTPM: 15.5
2082 Female, age 91, right hemisphere 19.0
2045 Male, age 76, both hemispheres 15.6
2527 Male, age 74, both hemispheres 14.9
1873 Female, age 85, both hemispheres 14.7
2749 Male, age 80, left hemisphere 13.1
Hippocampus, CA2
nTPM: 16.3
2437 Female, age 94, left hemisphere 18.3
1940 Female, age 85, left hemisphere 17.9
2113 Female, age 91, right hemisphere 17.4
1892 Male, age 76, both hemispheres 15.8
1963 Male, age 80, left hemisphere 14.6
2249 Male, age 74, both hemispheres 13.7
Hippocampus, CA3
nTPM: 15.1
1867 Male, age 76, both hemispheres 16.5
1891 Female, age 85, both hemispheres 15.6
2137 Male, age 80, left hemisphere 15.6
2861 Female, age 67, both hemispheres 15.0
2620 Female, age 94, left hemisphere 14.2
2436 Male, age 74, both hemispheres 13.6
Parahippocampal cortex
nTPM: 17.3
2622 Female, age 67, right hemisphere 18.8
2018 Male, age 76, both hemispheres 18.7
2532 Female, age 72, left hemisphere 18.3
1990 Female, age 91, right hemisphere 18.0
2693 Female, age 94, both hemispheres 17.8
1850 Male, age 80, both hemispheres 16.9
1933 Female, age 85, both hemispheres 16.6
2250 Female, age 67, right hemisphere 16.6
2692 Male, age 74, both hemispheres 15.9
2245 Female, age 91, both hemispheres 15.8
Perirhinal gyrus
nTPM: 16.2
1847 Female, age 91, left hemisphere 17.0
2521 Female, age 94, right hemisphere 16.5
2848 Male, age 76, right hemisphere 16.1
1841 Female, age 85, right hemisphere 15.9
1794 Male, age 80, right hemisphere 15.4
Subiculum
nTPM: 17.6
2438 Female, age 94, left hemisphere 20.6
2729 Female, age 91, right hemisphere 20.4
2619 Male, age 74, both hemispheres 16.8
1977 Female, age 85, both hemispheres 16.1
1901 Male, age 80, both hemispheres 15.9
2042 Male, age 76, both hemispheres 15.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 35.8
Min nTPM: 3.4
Std nTPM: 5.0
Median nTPM: 13.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 35.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 31.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 28.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 27.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 27.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 26.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 25.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 24.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 23.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 21.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 21.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.0
FF:10153-102I9 76 years, female 10.7
FF:10169-103B7 60 years, female 5.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.6
Samples: 4

Max nTPM: 2.6
Min nTPM: 2.5
Sample A Female 2.6
Sample B Female 2.6
Sample C Male 2.5
Sample D Male 2.5
Entorhinal cortex
nTPM: 3.0
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.7
Sample A Female 2.7
Sample B Female 3.1
Sample C Male 3.3
Sample D Male 2.7
Subiculum
nTPM: 2.8
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.4
Sample A Female 3.3
Sample B Female 3.0
Sample C Male 2.4
Sample D Male 2.6
Ventral hippocampus
nTPM: 2.8
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 2.8
Sample C Male 3.3
Sample D Male 2.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.6
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.0
Sample A Male 2.0
Sample B Male 3.6
Sample C Female 2.0
Sample D Female 2.6
Hippocampal formation
nTPM: 2.1
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.6
Sample A Male 2.4
Sample B Male 1.9
Sample C Female 1.6
Sample D Female 2.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
71764619 Antisense, RP_050926_01_E05, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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