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RNF187
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:15.9 nTPM
HPA:15.9 nTPM
GTEx:79.3 nTPM
FANTOM5:119.9 Scaled Tags Per Million
Pig:22.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030098
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.5
1898 Male, age 80, left hemisphere 21.4
2621 Female, age 67, right hemisphere 18.3
2148 Female, age 91, left hemisphere 17.6
1911 Female, age 85, right hemisphere 12.8
2529 Female, age 94, left hemisphere 11.8
1855 Male, age 76, left hemisphere 11.4
Dentate gyrus
nTPM: 15.4
2530 Female, age 94, left hemisphere 22.7
1927 Female, age 91, both hemispheres 19.4
2010 Male, age 76, both hemispheres 16.4
2528 Male, age 74, both hemispheres 13.5
2531 Female, age 67, both hemispheres 11.0
2246 Female, age 85, both hemispheres 9.7
Entorhinal gyrus
nTPM: 15.6
2764 Male, age 80, right hemisphere 21.0
2613 Female, age 94, left hemisphere 18.7
1938 Female, age 85, left hemisphere 16.1
1787 Male, age 76, left hemisphere 14.6
2117 Female, age 91, right hemisphere 13.8
2686 Male, age 75, right hemisphere 9.2
Hippocampus, CA1
nTPM: 15.9
2749 Male, age 80, left hemisphere 30.0
1873 Female, age 85, both hemispheres 16.9
2527 Male, age 74, both hemispheres 13.5
2045 Male, age 76, both hemispheres 11.6
2082 Female, age 91, right hemisphere 7.6
Hippocampus, CA2
nTPM: 15.3
1963 Male, age 80, left hemisphere 23.8
2249 Male, age 74, both hemispheres 16.7
1892 Male, age 76, both hemispheres 15.1
1940 Female, age 85, left hemisphere 13.2
2437 Female, age 94, left hemisphere 11.6
2113 Female, age 91, right hemisphere 11.3
Hippocampus, CA3
nTPM: 14.2
2137 Male, age 80, left hemisphere 21.6
2620 Female, age 94, left hemisphere 16.9
2861 Female, age 67, both hemispheres 14.1
1867 Male, age 76, both hemispheres 13.4
1891 Female, age 85, both hemispheres 11.3
2436 Male, age 74, both hemispheres 8.2
Parahippocampal cortex
nTPM: 14.2
2245 Female, age 91, both hemispheres 17.8
1990 Female, age 91, right hemisphere 17.2
2622 Female, age 67, right hemisphere 17.1
1933 Female, age 85, both hemispheres 15.9
2532 Female, age 72, left hemisphere 15.2
1850 Male, age 80, both hemispheres 14.8
2250 Female, age 67, right hemisphere 14.6
2018 Male, age 76, both hemispheres 13.1
2693 Female, age 94, both hemispheres 8.4
2692 Male, age 74, both hemispheres 7.8
Perirhinal gyrus
nTPM: 14.8
1794 Male, age 80, right hemisphere 18.8
1847 Female, age 91, left hemisphere 17.2
1841 Female, age 85, right hemisphere 13.5
2521 Female, age 94, right hemisphere 12.3
2848 Male, age 76, right hemisphere 12.1
Subiculum
nTPM: 12.4
1977 Female, age 85, both hemispheres 16.9
1901 Male, age 80, both hemispheres 16.7
2619 Male, age 74, both hemispheres 14.8
2729 Female, age 91, right hemisphere 11.5
2042 Male, age 76, both hemispheres 9.9
2438 Female, age 94, left hemisphere 4.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.3
Samples: 197

Max nTPM: 203.4
Min nTPM: 18.0
Std nTPM: 38.2
Median nTPM: 71.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 203.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 186.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 184.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 166.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 163.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 161.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 160.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 157.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 155.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 154.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 149.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.9
FF:10169-103B7 60 years, female 136.0
FF:10153-102I9 76 years, female 103.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 25.8
Min nTPM: 17.8
Sample A Female 25.8
Sample B Female 22.0
Sample C Male 20.9
Sample D Male 17.8
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 22.5
Min nTPM: 18.2
Sample A Female 22.5
Sample B Female 21.4
Sample C Male 21.7
Sample D Male 18.2
Subiculum
nTPM: 20.7
Samples: 4

Max nTPM: 26.7
Min nTPM: 16.6
Sample A Female 26.7
Sample B Female 19.4
Sample C Male 20.0
Sample D Male 16.6
Ventral hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 27.9
Min nTPM: 17.5
Sample A Female 21.8
Sample B Female 17.5
Sample C Male 27.9
Sample D Male 20.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.