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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:84.1 nTPM
HPA:84.1 nTPM
GTEx:75.5 nTPM
FANTOM5:108.4 Scaled Tags Per Million
Pig:22.1 nTPM
Mouse:18.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024068
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.1
Sample id Sample description nTPM
Hippocampus
nTPM: 51.4
1911 Female, age 85, right hemisphere 70.9
2529 Female, age 94, left hemisphere 57.5
2621 Female, age 67, right hemisphere 53.4
2148 Female, age 91, left hemisphere 45.3
1898 Male, age 80, left hemisphere 43.6
1855 Male, age 76, left hemisphere 37.7
Dentate gyrus
nTPM: 57.4
2530 Female, age 94, left hemisphere 86.1
2010 Male, age 76, both hemispheres 63.1
2246 Female, age 85, both hemispheres 57.2
2528 Male, age 74, both hemispheres 52.4
2531 Female, age 67, both hemispheres 44.0
1927 Female, age 91, both hemispheres 41.7
Entorhinal gyrus
nTPM: 58.5
2117 Female, age 91, right hemisphere 80.7
2764 Male, age 80, right hemisphere 73.6
2613 Female, age 94, left hemisphere 55.5
2686 Male, age 75, right hemisphere 50.3
1938 Female, age 85, left hemisphere 46.9
1787 Male, age 76, left hemisphere 44.0
Hippocampus, CA1
nTPM: 45.3
2082 Female, age 91, right hemisphere 61.0
1873 Female, age 85, both hemispheres 50.8
2527 Male, age 74, both hemispheres 50.6
2749 Male, age 80, left hemisphere 37.0
2045 Male, age 76, both hemispheres 27.2
Hippocampus, CA2
nTPM: 58.2
1963 Male, age 80, left hemisphere 65.0
2437 Female, age 94, left hemisphere 64.9
2249 Male, age 74, both hemispheres 61.9
2113 Female, age 91, right hemisphere 61.7
1940 Female, age 85, left hemisphere 61.4
1892 Male, age 76, both hemispheres 34.2
Hippocampus, CA3
nTPM: 43.6
1891 Female, age 85, both hemispheres 89.6
1867 Male, age 76, both hemispheres 45.2
2436 Male, age 74, both hemispheres 37.3
2620 Female, age 94, left hemisphere 34.1
2137 Male, age 80, left hemisphere 33.8
2861 Female, age 67, both hemispheres 21.7
Parahippocampal cortex
nTPM: 55.4
2692 Male, age 74, both hemispheres 83.4
2532 Female, age 72, left hemisphere 72.3
1990 Female, age 91, right hemisphere 70.6
2018 Male, age 76, both hemispheres 58.3
1850 Male, age 80, both hemispheres 56.3
2693 Female, age 94, both hemispheres 53.9
1933 Female, age 85, both hemispheres 49.5
2245 Female, age 91, both hemispheres 49.5
2250 Female, age 67, right hemisphere 33.9
2622 Female, age 67, right hemisphere 26.4
Perirhinal gyrus
nTPM: 39.1
2521 Female, age 94, right hemisphere 42.9
2848 Male, age 76, right hemisphere 42.7
1794 Male, age 80, right hemisphere 37.7
1847 Female, age 91, left hemisphere 36.3
1841 Female, age 85, right hemisphere 35.9
Subiculum
nTPM: 84.1
2042 Male, age 76, both hemispheres 131.5
1901 Male, age 80, both hemispheres 107.1
2438 Female, age 94, left hemisphere 78.5
1977 Female, age 85, both hemispheres 73.9
2619 Male, age 74, both hemispheres 59.4
2729 Female, age 91, right hemisphere 54.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.5
Samples: 197

Max nTPM: 269.2
Min nTPM: 15.1
Std nTPM: 47.9
Median nTPM: 64.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 269.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 223.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 210.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 208.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 200.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 198.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 186.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 186.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 182.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 176.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 175.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.4
FF:10153-102I9 76 years, female 120.7
FF:10169-103B7 60 years, female 96.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 26.2
Min nTPM: 17.5
Sample A Female 23.4
Sample B Female 21.3
Sample C Male 26.2
Sample D Male 17.5
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 18.5
Min nTPM: 16.1
Sample A Female 16.2
Sample B Female 18.5
Sample C Male 16.1
Sample D Male 17.2
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 17.2
Min nTPM: 15.1
Sample A Female 17.2
Sample B Female 16.0
Sample C Male 15.1
Sample D Male 16.3
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 25.8
Min nTPM: 15.4
Sample A Female 16.5
Sample B Female 15.4
Sample C Male 16.6
Sample D Male 25.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.4
Samples: 4

Max nTPM: 19.1
Min nTPM: 18.1
Sample A Male 19.1
Sample B Male 18.1
Sample C Female 18.3
Sample D Female 18.2
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 19.1
Min nTPM: 16.9
Sample A Male 17.1
Sample B Male 16.9
Sample C Female 17.4
Sample D Female 19.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71487172 Antisense, RP_050913_01_D04, Mouse strain C57BL/6J (56 days, male) 0.0

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