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FAM107A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:1745.7 nTPM
HPA:1745.7 nTPM
GTEx:847.4 nTPM
FANTOM5:1287.9 Scaled Tags Per Million
Mouse:341.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055888
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1745.7
Sample id Sample description nTPM
Hippocampus
nTPM: 1745.7
2529 Female, age 94, left hemisphere 1813.3
1898 Male, age 80, left hemisphere 1769.1
1911 Female, age 85, right hemisphere 1761.5
1855 Male, age 76, left hemisphere 1733.4
2148 Female, age 91, left hemisphere 1703.9
2621 Female, age 67, right hemisphere 1693.2
Dentate gyrus
nTPM: 1683.3
2530 Female, age 94, left hemisphere 1766.8
2528 Male, age 74, both hemispheres 1723.0
2246 Female, age 85, both hemispheres 1721.0
2010 Male, age 76, both hemispheres 1673.1
2531 Female, age 67, both hemispheres 1640.8
1927 Female, age 91, both hemispheres 1575.4
Entorhinal gyrus
nTPM: 1715.2
2686 Male, age 75, right hemisphere 1824.3
2117 Female, age 91, right hemisphere 1817.5
1787 Male, age 76, left hemisphere 1727.9
1938 Female, age 85, left hemisphere 1698.8
2764 Male, age 80, right hemisphere 1628.7
2613 Female, age 94, left hemisphere 1594.0
Hippocampus, CA1
nTPM: 1655.7
1873 Female, age 85, both hemispheres 1729.2
2527 Male, age 74, both hemispheres 1690.9
2082 Female, age 91, right hemisphere 1648.0
2749 Male, age 80, left hemisphere 1638.0
2045 Male, age 76, both hemispheres 1572.5
Hippocampus, CA2
nTPM: 1684.3
1940 Female, age 85, left hemisphere 1792.8
2437 Female, age 94, left hemisphere 1722.8
2113 Female, age 91, right hemisphere 1711.4
1963 Male, age 80, left hemisphere 1679.6
2249 Male, age 74, both hemispheres 1644.7
1892 Male, age 76, both hemispheres 1554.8
Hippocampus, CA3
nTPM: 1658.5
2861 Female, age 67, both hemispheres 1737.8
1891 Female, age 85, both hemispheres 1712.9
2620 Female, age 94, left hemisphere 1676.9
2137 Male, age 80, left hemisphere 1633.8
1867 Male, age 76, both hemispheres 1606.2
2436 Male, age 74, both hemispheres 1583.3
Parahippocampal cortex
nTPM: 1679.0
2622 Female, age 67, right hemisphere 1806.9
2692 Male, age 74, both hemispheres 1786.8
2245 Female, age 91, both hemispheres 1701.3
1933 Female, age 85, both hemispheres 1686.9
2250 Female, age 67, right hemisphere 1682.9
2018 Male, age 76, both hemispheres 1650.3
1990 Female, age 91, right hemisphere 1644.5
2532 Female, age 72, left hemisphere 1626.9
1850 Male, age 80, both hemispheres 1618.6
2693 Female, age 94, both hemispheres 1584.5
Perirhinal gyrus
nTPM: 1611.4
1841 Female, age 85, right hemisphere 1653.8
1847 Female, age 91, left hemisphere 1633.2
2848 Male, age 76, right hemisphere 1609.6
1794 Male, age 80, right hemisphere 1608.2
2521 Female, age 94, right hemisphere 1552.3
Subiculum
nTPM: 1715.4
2619 Male, age 74, both hemispheres 1808.0
2729 Female, age 91, right hemisphere 1757.7
2042 Male, age 76, both hemispheres 1756.1
2438 Female, age 94, left hemisphere 1681.9
1901 Male, age 80, both hemispheres 1663.8
1977 Female, age 85, both hemispheres 1625.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 847.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 847.4
Samples: 197

Max nTPM: 2313.9
Min nTPM: 273.0
Std nTPM: 329.4
Median nTPM: 800.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2313.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2184.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 2115.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1594.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 1567.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 1545.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 1526.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 1500.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1498.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1485.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 1447.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1287.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1287.9
FF:10153-102I9 76 years, female 1785.9
FF:10169-103B7 60 years, female 789.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 341.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 341.1
Samples: 4

Max nTPM: 421.1
Min nTPM: 283.6
Sample A Male 359.0
Sample B Male 300.5
Sample C Female 421.1
Sample D Female 283.6
Hippocampal formation
nTPM: 291.0
Samples: 4

Max nTPM: 326.4
Min nTPM: 231.0
Sample A Male 300.1
Sample B Male 231.0
Sample C Female 306.4
Sample D Female 326.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
74431465 Antisense, RP_060207_02_A08, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.