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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:308.8 nTPM
HPA:308.8 nTPM
GTEx:269.5 nTPM
FANTOM5:343.0 Scaled Tags Per Million
Mouse:159.9 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035152
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 308.8
Sample id Sample description nTPM
Hippocampus
nTPM: 233.1
1911 Female, age 85, right hemisphere 284.8
2529 Female, age 94, left hemisphere 264.7
2621 Female, age 67, right hemisphere 240.8
1898 Male, age 80, left hemisphere 213.1
1855 Male, age 76, left hemisphere 201.8
2148 Female, age 91, left hemisphere 193.2
Dentate gyrus
nTPM: 253.0
2530 Female, age 94, left hemisphere 480.1
2010 Male, age 76, both hemispheres 238.1
2531 Female, age 67, both hemispheres 221.8
2246 Female, age 85, both hemispheres 215.7
2528 Male, age 74, both hemispheres 206.6
1927 Female, age 91, both hemispheres 156.0
Entorhinal gyrus
nTPM: 252.6
2117 Female, age 91, right hemisphere 321.2
2764 Male, age 80, right hemisphere 286.8
2686 Male, age 75, right hemisphere 276.0
2613 Female, age 94, left hemisphere 220.6
1938 Female, age 85, left hemisphere 219.7
1787 Male, age 76, left hemisphere 191.3
Hippocampus, CA1
nTPM: 196.3
1873 Female, age 85, both hemispheres 224.9
2082 Female, age 91, right hemisphere 221.2
2527 Male, age 74, both hemispheres 218.4
2749 Male, age 80, left hemisphere 190.2
2045 Male, age 76, both hemispheres 126.8
Hippocampus, CA2
nTPM: 231.4
1963 Male, age 80, left hemisphere 300.5
2437 Female, age 94, left hemisphere 267.1
2249 Male, age 74, both hemispheres 237.2
2113 Female, age 91, right hemisphere 216.6
1940 Female, age 85, left hemisphere 207.4
1892 Male, age 76, both hemispheres 159.7
Hippocampus, CA3
nTPM: 181.1
1891 Female, age 85, both hemispheres 289.4
1867 Male, age 76, both hemispheres 181.3
2861 Female, age 67, both hemispheres 170.9
2436 Male, age 74, both hemispheres 158.8
2137 Male, age 80, left hemisphere 152.3
2620 Female, age 94, left hemisphere 134.1
Parahippocampal cortex
nTPM: 214.4
2532 Female, age 72, left hemisphere 326.7
2692 Male, age 74, both hemispheres 290.3
1990 Female, age 91, right hemisphere 225.6
2622 Female, age 67, right hemisphere 207.4
1850 Male, age 80, both hemispheres 206.6
2018 Male, age 76, both hemispheres 204.2
2245 Female, age 91, both hemispheres 199.2
1933 Female, age 85, both hemispheres 190.8
2693 Female, age 94, both hemispheres 150.4
2250 Female, age 67, right hemisphere 143.2
Perirhinal gyrus
nTPM: 153.7
2848 Male, age 76, right hemisphere 177.7
1794 Male, age 80, right hemisphere 169.3
1847 Female, age 91, left hemisphere 144.6
2521 Female, age 94, right hemisphere 142.4
1841 Female, age 85, right hemisphere 134.5
Subiculum
nTPM: 308.8
2042 Male, age 76, both hemispheres 399.3
1901 Male, age 80, both hemispheres 349.2
2438 Female, age 94, left hemisphere 337.2
1977 Female, age 85, both hemispheres 303.3
2619 Male, age 74, both hemispheres 257.9
2729 Female, age 91, right hemisphere 205.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 269.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 269.5
Samples: 197

Max nTPM: 1047.8
Min nTPM: 17.0
Std nTPM: 175.8
Median nTPM: 232.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1047.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 966.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 911.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 779.1
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 675.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 656.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 632.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 625.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 617.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 603.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 601.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 343.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 343.0
FF:10153-102I9 76 years, female 387.8
FF:10169-103B7 60 years, female 298.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 159.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 75.5
Samples: 4

Max nTPM: 104.1
Min nTPM: 35.1
Sample A Male 104.1
Sample B Male 73.4
Sample C Female 89.3
Sample D Female 35.1
Hippocampal formation
nTPM: 159.9
Samples: 4

Max nTPM: 244.1
Min nTPM: 101.3
Sample A Male 101.3
Sample B Male 110.7
Sample C Female 244.1
Sample D Female 183.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69201510 Antisense, RP_050317_03_A10, Mouse strain C57BL/6J (56 days, male) 4.4
69174034 Antisense, RP_050329_01_H11, Mouse strain C57BL/6J (56 days, male) 3.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.