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MFSD2A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:30.9 nTPM
HPA:30.9 nTPM
GTEx:22.3 nTPM
FANTOM5:32.7 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:26.6 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043107
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.9
Sample id Sample description nTPM
Hippocampus
nTPM: 30.4
1855 Male, age 76, left hemisphere 33.8
2621 Female, age 67, right hemisphere 30.7
1911 Female, age 85, right hemisphere 30.5
1898 Male, age 80, left hemisphere 29.5
2148 Female, age 91, left hemisphere 29.4
2529 Female, age 94, left hemisphere 28.7
Dentate gyrus
nTPM: 29.5
2530 Female, age 94, left hemisphere 32.6
2246 Female, age 85, both hemispheres 31.2
2010 Male, age 76, both hemispheres 30.4
2531 Female, age 67, both hemispheres 29.7
1927 Female, age 91, both hemispheres 26.9
2528 Male, age 74, both hemispheres 26.5
Entorhinal gyrus
nTPM: 26.9
2117 Female, age 91, right hemisphere 29.2
1938 Female, age 85, left hemisphere 27.9
2686 Male, age 75, right hemisphere 26.8
1787 Male, age 76, left hemisphere 26.3
2764 Male, age 80, right hemisphere 25.9
2613 Female, age 94, left hemisphere 25.3
Hippocampus, CA1
nTPM: 29.9
2527 Male, age 74, both hemispheres 32.2
2045 Male, age 76, both hemispheres 29.7
2082 Female, age 91, right hemisphere 29.7
1873 Female, age 85, both hemispheres 29.0
2749 Male, age 80, left hemisphere 28.8
Hippocampus, CA2
nTPM: 29.7
2249 Male, age 74, both hemispheres 34.2
1963 Male, age 80, left hemisphere 30.1
2113 Female, age 91, right hemisphere 29.3
1940 Female, age 85, left hemisphere 29.0
2437 Female, age 94, left hemisphere 28.6
1892 Male, age 76, both hemispheres 26.8
Hippocampus, CA3
nTPM: 30.9
2620 Female, age 94, left hemisphere 35.1
2861 Female, age 67, both hemispheres 34.3
1867 Male, age 76, both hemispheres 29.2
1891 Female, age 85, both hemispheres 29.1
2137 Male, age 80, left hemisphere 29.0
2436 Male, age 74, both hemispheres 28.3
Parahippocampal cortex
nTPM: 27.4
2018 Male, age 76, both hemispheres 29.4
2622 Female, age 67, right hemisphere 29.0
2245 Female, age 91, both hemispheres 28.0
2532 Female, age 72, left hemisphere 27.6
1933 Female, age 85, both hemispheres 27.3
2250 Female, age 67, right hemisphere 26.8
2693 Female, age 94, both hemispheres 26.8
2692 Male, age 74, both hemispheres 26.6
1990 Female, age 91, right hemisphere 26.5
1850 Male, age 80, both hemispheres 25.8
Perirhinal gyrus
nTPM: 26.5
2521 Female, age 94, right hemisphere 28.4
1847 Female, age 91, left hemisphere 26.8
1841 Female, age 85, right hemisphere 26.7
1794 Male, age 80, right hemisphere 25.7
2848 Male, age 76, right hemisphere 25.1
Subiculum
nTPM: 28.4
2042 Male, age 76, both hemispheres 30.5
1977 Female, age 85, both hemispheres 28.5
1901 Male, age 80, both hemispheres 28.2
2729 Female, age 91, right hemisphere 28.2
2438 Female, age 94, left hemisphere 27.6
2619 Male, age 74, both hemispheres 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.3
Samples: 197

Max nTPM: 95.0
Min nTPM: 4.7
Std nTPM: 11.9
Median nTPM: 20.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 95.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 72.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 65.8
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 59.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 50.5
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 47.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 45.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 44.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 43.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 42.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 41.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.7
FF:10169-103B7 60 years, female 37.6
FF:10153-102I9 76 years, female 27.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 16.2
Min nTPM: 10.9
Sample A Female 12.2
Sample B Female 10.9
Sample C Male 16.2
Sample D Male 10.9
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.3
Min nTPM: 13.2
Sample A Female 13.2
Sample B Female 13.7
Sample C Male 13.9
Sample D Male 15.3
Subiculum
nTPM: 11.4
Samples: 4

Max nTPM: 13.1
Min nTPM: 9.8
Sample A Female 10.6
Sample B Female 9.8
Sample C Male 13.1
Sample D Male 11.9
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 16.0
Min nTPM: 9.6
Sample A Female 11.2
Sample B Female 9.6
Sample C Male 16.0
Sample D Male 14.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 33.6
Min nTPM: 19.8
Sample A Male 23.7
Sample B Male 19.8
Sample C Female 33.6
Sample D Female 29.2
Hippocampal formation
nTPM: 26.0
Samples: 4

Max nTPM: 30.1
Min nTPM: 21.4
Sample A Male 23.5
Sample B Male 21.4
Sample C Female 30.1
Sample D Female 29.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68844397 Antisense, RP_050222_01_E08, Mouse strain C57BL/6J (56 days, male) 0.6
77280315 Antisense, RP_070116_01_B04, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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