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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:10.7 nTPM
HPA:10.7 nTPM
GTEx:12.8 nTPM
FANTOM5:53.0 Scaled Tags Per Million
Pig:15.0 nTPM
Mouse:18.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065246
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.7
Sample id Sample description nTPM
Hippocampus
nTPM: 7.7
2529 Female, age 94, left hemisphere 12.8
2621 Female, age 67, right hemisphere 11.2
2148 Female, age 91, left hemisphere 8.1
1911 Female, age 85, right hemisphere 8.0
1855 Male, age 76, left hemisphere 5.3
1898 Male, age 80, left hemisphere 0.7
Dentate gyrus
nTPM: 7.7
2010 Male, age 76, both hemispheres 12.3
2531 Female, age 67, both hemispheres 12.3
2530 Female, age 94, left hemisphere 8.2
2528 Male, age 74, both hemispheres 7.3
2246 Female, age 85, both hemispheres 5.9
1927 Female, age 91, both hemispheres 0.0
Entorhinal gyrus
nTPM: 10.7
2117 Female, age 91, right hemisphere 17.3
2764 Male, age 80, right hemisphere 15.1
2613 Female, age 94, left hemisphere 10.3
1787 Male, age 76, left hemisphere 8.0
1938 Female, age 85, left hemisphere 7.3
2686 Male, age 75, right hemisphere 5.9
Hippocampus, CA1
nTPM: 6.7
2045 Male, age 76, both hemispheres 12.2
2082 Female, age 91, right hemisphere 10.7
2527 Male, age 74, both hemispheres 9.6
2749 Male, age 80, left hemisphere 1.3
1873 Female, age 85, both hemispheres 0.0
Hippocampus, CA2
nTPM: 10.0
2249 Male, age 74, both hemispheres 14.3
1940 Female, age 85, left hemisphere 13.3
2437 Female, age 94, left hemisphere 12.3
2113 Female, age 91, right hemisphere 10.1
1963 Male, age 80, left hemisphere 9.9
1892 Male, age 76, both hemispheres 0.0
Hippocampus, CA3
nTPM: 6.0
2436 Male, age 74, both hemispheres 12.7
2861 Female, age 67, both hemispheres 8.0
2620 Female, age 94, left hemisphere 7.0
1891 Female, age 85, both hemispheres 6.8
2137 Male, age 80, left hemisphere 1.8
1867 Male, age 76, both hemispheres 0.0
Parahippocampal cortex
nTPM: 8.9
2532 Female, age 72, left hemisphere 14.2
2622 Female, age 67, right hemisphere 12.6
2018 Male, age 76, both hemispheres 11.5
2245 Female, age 91, both hemispheres 11.0
2693 Female, age 94, both hemispheres 10.8
2692 Male, age 74, both hemispheres 10.6
1933 Female, age 85, both hemispheres 7.4
1990 Female, age 91, right hemisphere 7.0
2250 Female, age 67, right hemisphere 3.3
1850 Male, age 80, both hemispheres 0.6
Perirhinal gyrus
nTPM: 3.0
2521 Female, age 94, right hemisphere 11.7
1794 Male, age 80, right hemisphere 2.2
2848 Male, age 76, right hemisphere 1.1
1841 Female, age 85, right hemisphere 0.0
1847 Female, age 91, left hemisphere 0.0
Subiculum
nTPM: 10.2
2619 Male, age 74, both hemispheres 13.2
2042 Male, age 76, both hemispheres 12.7
1901 Male, age 80, both hemispheres 12.2
1977 Female, age 85, both hemispheres 9.8
2729 Female, age 91, right hemisphere 9.7
2438 Female, age 94, left hemisphere 3.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 41.7
Min nTPM: 2.5
Std nTPM: 7.1
Median nTPM: 11.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 41.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 38.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 36.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 33.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 30.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 29.8
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 29.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 28.9
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 26.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 26.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 25.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.0
FF:10153-102I9 76 years, female 53.6
FF:10169-103B7 60 years, female 52.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 14.6
Min nTPM: 12.3
Sample A Female 14.6
Sample B Female 13.0
Sample C Male 12.3
Sample D Male 13.3
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 16.1
Min nTPM: 13.6
Sample A Female 15.7
Sample B Female 13.6
Sample C Male 16.1
Sample D Male 14.7
Subiculum
nTPM: 12.9
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.3
Sample A Female 15.9
Sample B Female 11.3
Sample C Male 12.7
Sample D Male 11.6
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.3
Sample A Female 11.3
Sample B Female 9.3
Sample C Male 14.8
Sample D Male 13.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 20.5
Min nTPM: 15.0
Sample A Male 17.6
Sample B Male 20.5
Sample C Female 15.0
Sample D Female 19.6
Hippocampal formation
nTPM: 14.6
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.1
Sample A Male 13.1
Sample B Male 13.6
Sample C Female 18.1
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70238633 Antisense, RP_050526_03_E12, Mouse strain C57BL/6J (56 days, male) 0.4
73817443 Antisense, RP_051101_01_B07, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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