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NSG1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.4 nTPM
HPA:18.4 nTPM
GTEx:16.0 nTPM
FANTOM5:37.2 Scaled Tags Per Million
Pig:141.9 nTPM
Mouse:328.1 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.4
Sample id Sample description nTPM
Hippocampus
nTPM: 5.8
1898 Male, age 80, left hemisphere 11.3
2529 Female, age 94, left hemisphere 8.4
2621 Female, age 67, right hemisphere 7.0
2148 Female, age 91, left hemisphere 5.4
1911 Female, age 85, right hemisphere 2.1
1855 Male, age 76, left hemisphere 0.5
Dentate gyrus
nTPM: 8.7
2530 Female, age 94, left hemisphere 13.1
1927 Female, age 91, both hemispheres 10.9
2528 Male, age 74, both hemispheres 9.9
2246 Female, age 85, both hemispheres 8.5
2531 Female, age 67, both hemispheres 8.2
2010 Male, age 76, both hemispheres 1.9
Entorhinal gyrus
nTPM: 13.3
2686 Male, age 75, right hemisphere 19.6
2613 Female, age 94, left hemisphere 19.4
2764 Male, age 80, right hemisphere 13.1
1787 Male, age 76, left hemisphere 12.9
1938 Female, age 85, left hemisphere 8.6
2117 Female, age 91, right hemisphere 6.0
Hippocampus, CA1
nTPM: 6.7
2082 Female, age 91, right hemisphere 10.1
2527 Male, age 74, both hemispheres 8.9
2749 Male, age 80, left hemisphere 8.7
1873 Female, age 85, both hemispheres 3.4
2045 Male, age 76, both hemispheres 2.2
Hippocampus, CA2
nTPM: 8.6
2437 Female, age 94, left hemisphere 20.8
1892 Male, age 76, both hemispheres 11.9
1963 Male, age 80, left hemisphere 6.1
2113 Female, age 91, right hemisphere 4.6
2249 Male, age 74, both hemispheres 4.6
1940 Female, age 85, left hemisphere 3.3
Hippocampus, CA3
nTPM: 8.1
2620 Female, age 94, left hemisphere 12.3
2436 Male, age 74, both hemispheres 10.6
2137 Male, age 80, left hemisphere 8.3
1867 Male, age 76, both hemispheres 7.1
2861 Female, age 67, both hemispheres 6.0
1891 Female, age 85, both hemispheres 4.3
Parahippocampal cortex
nTPM: 13.1
1990 Female, age 91, right hemisphere 20.0
2250 Female, age 67, right hemisphere 19.7
2692 Male, age 74, both hemispheres 18.1
2693 Female, age 94, both hemispheres 16.4
2245 Female, age 91, both hemispheres 12.3
2622 Female, age 67, right hemisphere 11.5
1850 Male, age 80, both hemispheres 11.3
2532 Female, age 72, left hemisphere 10.7
1933 Female, age 85, both hemispheres 9.1
2018 Male, age 76, both hemispheres 1.7
Perirhinal gyrus
nTPM: 18.4
1847 Female, age 91, left hemisphere 28.0
2521 Female, age 94, right hemisphere 20.7
1794 Male, age 80, right hemisphere 20.1
1841 Female, age 85, right hemisphere 14.7
2848 Male, age 76, right hemisphere 8.4
Subiculum
nTPM: 12.5
2619 Male, age 74, both hemispheres 28.1
2438 Female, age 94, left hemisphere 22.1
1977 Female, age 85, both hemispheres 13.7
1901 Male, age 80, both hemispheres 7.7
2729 Female, age 91, right hemisphere 3.6
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.0
Samples: 197

Max nTPM: 64.2
Min nTPM: 1.0
Std nTPM: 12.6
Median nTPM: 12.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 64.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 58.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 58.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 54.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 49.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 49.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 47.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 43.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 42.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 41.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 40.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.2
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 27.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 141.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 123.6
Samples: 4

Max nTPM: 153.5
Min nTPM: 92.6
Sample A Female 142.9
Sample B Female 153.5
Sample C Male 105.2
Sample D Male 92.6
Entorhinal cortex
nTPM: 120.6
Samples: 4

Max nTPM: 149.2
Min nTPM: 101.9
Sample A Female 149.2
Sample B Female 121.3
Sample C Male 109.9
Sample D Male 101.9
Subiculum
nTPM: 127.0
Samples: 4

Max nTPM: 167.3
Min nTPM: 101.9
Sample A Female 167.3
Sample B Female 109.0
Sample C Male 129.8
Sample D Male 101.9
Ventral hippocampus
nTPM: 142.0
Samples: 4

Max nTPM: 189.8
Min nTPM: 95.8
Sample A Female 142.7
Sample B Female 95.8
Sample C Male 189.8
Sample D Male 139.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 328.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 296.6
Samples: 4

Max nTPM: 329.9
Min nTPM: 260.0
Sample A Male 260.0
Sample B Male 288.8
Sample C Female 307.8
Sample D Female 329.9
Hippocampal formation
nTPM: 328.1
Samples: 4

Max nTPM: 364.7
Min nTPM: 305.8
Sample A Male 364.7
Sample B Male 305.8
Sample C Female 334.0
Sample D Female 307.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
70429327 Antisense, RP_050614_01_D12, Mouse strain C57BL/6J (56 days, male) 17.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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