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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:60.0 nTPM
HPA:60.0 nTPM
GTEx:66.4 nTPM
FANTOM5:98.8 Scaled Tags Per Million
Pig:109.3 nTPM
Mouse:257.6 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010968
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.0
Sample id Sample description nTPM
Hippocampus
nTPM: 57.5
1898 Male, age 80, left hemisphere 62.6
2529 Female, age 94, left hemisphere 57.7
1855 Male, age 76, left hemisphere 57.5
2621 Female, age 67, right hemisphere 56.0
1911 Female, age 85, right hemisphere 55.8
2148 Female, age 91, left hemisphere 55.2
Dentate gyrus
nTPM: 58.4
2530 Female, age 94, left hemisphere 61.3
2010 Male, age 76, both hemispheres 61.2
2246 Female, age 85, both hemispheres 58.4
1927 Female, age 91, both hemispheres 57.9
2528 Male, age 74, both hemispheres 57.9
2531 Female, age 67, both hemispheres 53.5
Entorhinal gyrus
nTPM: 57.9
1938 Female, age 85, left hemisphere 60.4
2117 Female, age 91, right hemisphere 60.3
2764 Male, age 80, right hemisphere 60.3
1787 Male, age 76, left hemisphere 58.0
2613 Female, age 94, left hemisphere 55.1
2686 Male, age 75, right hemisphere 53.3
Hippocampus, CA1
nTPM: 59.8
2749 Male, age 80, left hemisphere 62.4
1873 Female, age 85, both hemispheres 60.5
2045 Male, age 76, both hemispheres 60.2
2527 Male, age 74, both hemispheres 59.3
2082 Female, age 91, right hemisphere 56.6
Hippocampus, CA2
nTPM: 57.8
2249 Male, age 74, both hemispheres 62.4
1892 Male, age 76, both hemispheres 59.2
2113 Female, age 91, right hemisphere 58.0
2437 Female, age 94, left hemisphere 57.4
1963 Male, age 80, left hemisphere 55.7
1940 Female, age 85, left hemisphere 54.1
Hippocampus, CA3
nTPM: 57.8
1867 Male, age 76, both hemispheres 60.1
2436 Male, age 74, both hemispheres 60.1
2620 Female, age 94, left hemisphere 59.4
1891 Female, age 85, both hemispheres 59.3
2137 Male, age 80, left hemisphere 57.3
2861 Female, age 67, both hemispheres 50.7
Parahippocampal cortex
nTPM: 57.4
1850 Male, age 80, both hemispheres 60.7
1933 Female, age 85, both hemispheres 58.7
2622 Female, age 67, right hemisphere 58.4
1990 Female, age 91, right hemisphere 58.3
2250 Female, age 67, right hemisphere 58.0
2018 Male, age 76, both hemispheres 57.3
2245 Female, age 91, both hemispheres 56.8
2532 Female, age 72, left hemisphere 56.6
2693 Female, age 94, both hemispheres 54.8
2692 Male, age 74, both hemispheres 54.6
Perirhinal gyrus
nTPM: 60.0
1794 Male, age 80, right hemisphere 63.9
1841 Female, age 85, right hemisphere 63.1
1847 Female, age 91, left hemisphere 62.3
2521 Female, age 94, right hemisphere 55.5
2848 Male, age 76, right hemisphere 55.5
Subiculum
nTPM: 59.0
2619 Male, age 74, both hemispheres 62.5
1977 Female, age 85, both hemispheres 61.6
2042 Male, age 76, both hemispheres 60.9
1901 Male, age 80, both hemispheres 57.4
2729 Female, age 91, right hemisphere 56.7
2438 Female, age 94, left hemisphere 54.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.4
Samples: 197

Max nTPM: 103.0
Min nTPM: 37.6
Std nTPM: 9.9
Median nTPM: 65.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 103.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 100.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 95.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 88.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 87.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 86.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 85.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 85.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 84.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 83.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 82.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.8
FF:10169-103B7 60 years, female 125.5
FF:10153-102I9 76 years, female 72.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 109.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 109.3
Samples: 4

Max nTPM: 135.4
Min nTPM: 82.7
Sample A Female 135.4
Sample B Female 108.3
Sample C Male 110.7
Sample D Male 82.7
Entorhinal cortex
nTPM: 102.9
Samples: 4

Max nTPM: 120.8
Min nTPM: 86.3
Sample A Female 100.6
Sample B Female 120.8
Sample C Male 103.8
Sample D Male 86.3
Subiculum
nTPM: 96.7
Samples: 4

Max nTPM: 123.7
Min nTPM: 85.7
Sample A Female 123.7
Sample B Female 90.7
Sample C Male 85.7
Sample D Male 86.5
Ventral hippocampus
nTPM: 99.3
Samples: 4

Max nTPM: 120.4
Min nTPM: 83.1
Sample A Female 120.4
Sample B Female 83.1
Sample C Male 98.8
Sample D Male 94.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 257.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 257.1
Samples: 4

Max nTPM: 281.6
Min nTPM: 240.9
Sample A Male 240.9
Sample B Male 281.6
Sample C Female 258.4
Sample D Female 247.4
Hippocampal formation
nTPM: 257.6
Samples: 4

Max nTPM: 289.5
Min nTPM: 239.6
Sample A Male 289.5
Sample B Male 248.1
Sample C Female 239.6
Sample D Female 253.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
71486943 Antisense, RP_050913_01_A04, Mouse strain C57BL/6J (56 days, male) 5.1

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