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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:22.1 nTPM
HPA:22.1 nTPM
GTEx:16.7 nTPM
FANTOM5:20.5 Scaled Tags Per Million
Pig:10.8 nTPM
Mouse:19.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005004
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.1
Sample id Sample description nTPM
Hippocampus
nTPM: 20.8
1898 Male, age 80, left hemisphere 22.7
1911 Female, age 85, right hemisphere 22.6
2148 Female, age 91, left hemisphere 20.4
1855 Male, age 76, left hemisphere 20.2
2621 Female, age 67, right hemisphere 19.7
2529 Female, age 94, left hemisphere 18.9
Dentate gyrus
nTPM: 20.2
1927 Female, age 91, both hemispheres 22.7
2010 Male, age 76, both hemispheres 21.2
2246 Female, age 85, both hemispheres 20.4
2528 Male, age 74, both hemispheres 19.5
2531 Female, age 67, both hemispheres 19.3
2530 Female, age 94, left hemisphere 17.9
Entorhinal gyrus
nTPM: 20.9
2686 Male, age 75, right hemisphere 22.2
1787 Male, age 76, left hemisphere 21.3
2764 Male, age 80, right hemisphere 21.1
1938 Female, age 85, left hemisphere 20.9
2613 Female, age 94, left hemisphere 20.1
2117 Female, age 91, right hemisphere 19.7
Hippocampus, CA1
nTPM: 22.1
2749 Male, age 80, left hemisphere 26.9
2527 Male, age 74, both hemispheres 21.6
1873 Female, age 85, both hemispheres 21.4
2082 Female, age 91, right hemisphere 20.6
2045 Male, age 76, both hemispheres 19.9
Hippocampus, CA2
nTPM: 21.2
1892 Male, age 76, both hemispheres 23.4
1963 Male, age 80, left hemisphere 21.6
2113 Female, age 91, right hemisphere 21.1
2249 Male, age 74, both hemispheres 20.7
2437 Female, age 94, left hemisphere 20.1
1940 Female, age 85, left hemisphere 20.0
Hippocampus, CA3
nTPM: 21.6
2137 Male, age 80, left hemisphere 28.9
1867 Male, age 76, both hemispheres 22.3
1891 Female, age 85, both hemispheres 21.0
2436 Male, age 74, both hemispheres 20.4
2620 Female, age 94, left hemisphere 18.8
2861 Female, age 67, both hemispheres 18.5
Parahippocampal cortex
nTPM: 20.9
2018 Male, age 76, both hemispheres 22.1
2245 Female, age 91, both hemispheres 21.9
1850 Male, age 80, both hemispheres 21.4
2692 Male, age 74, both hemispheres 21.3
1990 Female, age 91, right hemisphere 21.1
2693 Female, age 94, both hemispheres 21.1
1933 Female, age 85, both hemispheres 20.9
2622 Female, age 67, right hemisphere 20.5
2532 Female, age 72, left hemisphere 19.7
2250 Female, age 67, right hemisphere 19.6
Perirhinal gyrus
nTPM: 21.6
1847 Female, age 91, left hemisphere 23.3
1841 Female, age 85, right hemisphere 22.1
1794 Male, age 80, right hemisphere 21.3
2521 Female, age 94, right hemisphere 20.9
2848 Male, age 76, right hemisphere 20.4
Subiculum
nTPM: 20.0
1901 Male, age 80, both hemispheres 22.5
2042 Male, age 76, both hemispheres 20.7
1977 Female, age 85, both hemispheres 20.3
2619 Male, age 74, both hemispheres 19.9
2729 Female, age 91, right hemisphere 19.8
2438 Female, age 94, left hemisphere 16.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.7
Samples: 197

Max nTPM: 32.4
Min nTPM: 9.1
Std nTPM: 4.0
Median nTPM: 15.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 32.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 29.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 28.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 27.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 26.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 26.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 26.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 26.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 24.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 24.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.5
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 18.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 13.1
Min nTPM: 8.7
Sample A Female 13.1
Sample B Female 10.3
Sample C Male 11.1
Sample D Male 8.7
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.1
Sample A Female 10.1
Sample B Female 12.0
Sample C Male 9.3
Sample D Male 8.1
Subiculum
nTPM: 9.6
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.4
Sample A Female 11.9
Sample B Female 8.4
Sample C Male 9.4
Sample D Male 8.5
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.7
Sample A Female 10.7
Sample B Female 7.7
Sample C Male 11.9
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 20.8
Min nTPM: 17.1
Sample A Male 17.1
Sample B Male 20.8
Sample C Female 19.3
Sample D Female 20.2
Hippocampal formation
nTPM: 19.3
Samples: 4

Max nTPM: 21.4
Min nTPM: 17.7
Sample A Male 21.4
Sample B Male 18.5
Sample C Female 19.6
Sample D Female 17.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71764219 Antisense, RP_050921_03_D11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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