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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:6.6 nTPM
HPA:6.6 nTPM
GTEx:11.0 nTPM
FANTOM5:13.2 Scaled Tags Per Million
Pig:4.8 nTPM
Mouse:13.5 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022834Antibody HPA023379Antibody HPA027844
Glial cells Not detectedLowLow
Neuronal cells Not detectedLowHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 6.6
Sample id Sample description nTPM
Hippocampus
nTPM: 6.6
2148 Female, age 91, left hemisphere 7.8
2529 Female, age 94, left hemisphere 6.9
1855 Male, age 76, left hemisphere 6.7
1911 Female, age 85, right hemisphere 6.4
1898 Male, age 80, left hemisphere 5.9
2621 Female, age 67, right hemisphere 5.8
Dentate gyrus
nTPM: 6.4
2528 Male, age 74, both hemispheres 6.9
1927 Female, age 91, both hemispheres 6.7
2531 Female, age 67, both hemispheres 6.7
2246 Female, age 85, both hemispheres 6.4
2010 Male, age 76, both hemispheres 6.1
2530 Female, age 94, left hemisphere 5.9
Entorhinal gyrus
nTPM: 6.4
2613 Female, age 94, left hemisphere 7.1
2764 Male, age 80, right hemisphere 6.9
2686 Male, age 75, right hemisphere 6.6
2117 Female, age 91, right hemisphere 6.5
1787 Male, age 76, left hemisphere 6.0
1938 Female, age 85, left hemisphere 5.3
Hippocampus, CA1
nTPM: 6.0
1873 Female, age 85, both hemispheres 6.9
2527 Male, age 74, both hemispheres 6.7
2082 Female, age 91, right hemisphere 6.3
2045 Male, age 76, both hemispheres 5.6
2749 Male, age 80, left hemisphere 4.5
Hippocampus, CA2
nTPM: 6.5
2113 Female, age 91, right hemisphere 7.2
1940 Female, age 85, left hemisphere 7.0
2437 Female, age 94, left hemisphere 6.7
2249 Male, age 74, both hemispheres 6.4
1963 Male, age 80, left hemisphere 6.1
1892 Male, age 76, both hemispheres 5.6
Hippocampus, CA3
nTPM: 6.0
2436 Male, age 74, both hemispheres 7.0
2861 Female, age 67, both hemispheres 6.8
1891 Female, age 85, both hemispheres 6.6
2620 Female, age 94, left hemisphere 6.0
1867 Male, age 76, both hemispheres 4.9
2137 Male, age 80, left hemisphere 4.7
Parahippocampal cortex
nTPM: 6.0
2532 Female, age 72, left hemisphere 7.5
1990 Female, age 91, right hemisphere 7.2
2622 Female, age 67, right hemisphere 6.9
2693 Female, age 94, both hemispheres 6.0
2692 Male, age 74, both hemispheres 5.7
1850 Male, age 80, both hemispheres 5.6
2018 Male, age 76, both hemispheres 5.6
2245 Female, age 91, both hemispheres 5.5
2250 Female, age 67, right hemisphere 5.4
1933 Female, age 85, both hemispheres 4.8
Perirhinal gyrus
nTPM: 5.7
2521 Female, age 94, right hemisphere 6.5
2848 Male, age 76, right hemisphere 5.9
1794 Male, age 80, right hemisphere 5.6
1847 Female, age 91, left hemisphere 5.4
1841 Female, age 85, right hemisphere 5.1
Subiculum
nTPM: 6.3
2729 Female, age 91, right hemisphere 7.3
2619 Male, age 74, both hemispheres 7.1
1901 Male, age 80, both hemispheres 6.6
2042 Male, age 76, both hemispheres 6.2
1977 Female, age 85, both hemispheres 5.9
2438 Female, age 94, left hemisphere 4.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.0
Samples: 197

Max nTPM: 22.8
Min nTPM: 4.5
Std nTPM: 2.9
Median nTPM: 10.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 22.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 22.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 19.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 18.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 18.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 18.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 18.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 17.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 16.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 16.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 16.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.2
FF:10153-102I9 76 years, female 16.0
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.3
Sample A Female 5.0
Sample B Female 3.8
Sample C Male 4.5
Sample D Male 3.3
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.8
Sample A Female 4.1
Sample B Female 3.9
Sample C Male 4.4
Sample D Male 3.8
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.7
Sample A Female 5.3
Sample B Female 4.4
Sample C Male 4.2
Sample D Male 3.7
Ventral hippocampus
nTPM: 4.8
Samples: 4

Max nTPM: 6.3
Min nTPM: 3.6
Sample A Female 5.4
Sample B Female 3.9
Sample C Male 6.3
Sample D Male 3.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.9
Sample A Male 14.6
Sample B Male 12.9
Sample C Female 14.8
Sample D Female 11.9
Hippocampal formation
nTPM: 12.0
Samples: 4

Max nTPM: 15.9
Min nTPM: 9.2
Sample A Male 15.9
Sample B Male 9.2
Sample C Female 10.1
Sample D Female 12.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73423787 Antisense, RP_051019_03_A05, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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