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GPS1
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:55.9 nTPM
HPA:55.9 nTPM
GTEx:73.2 nTPM
FANTOM5:46.1 Scaled Tags Per Million
Pig:37.1 nTPM
Mouse:147.2 nTPM
Allen mouse:6.8 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 55.9
Sample id Sample description nTPM
Amygdala
nTPM: 54.5
2517 Female, age 94, left hemisphere 56.8
2814 Male, age 76, right hemisphere 56.5
1987 Female, age 91, left hemisphere 54.5
2514 Male, age 75, right hemisphere 52.8
2695 Female, age 67, right hemisphere 51.8
Basal amygdala
nTPM: 54.0
2243 Female, age 91, right hemisphere 57.1
2609 Male, age 75, right hemisphere 56.9
2685 Female, age 94, left hemisphere 55.1
2110 Male, age 80, left hemisphere 54.3
1955 Male, age 76, both hemispheres 52.5
2827 Female, age 67, right hemisphere 48.4
Central amygdala
nTPM: 55.1
2826 Female, age 94, left hemisphere 60.5
1905 Male, age 76, both hemispheres 54.4
2239 Male, age 80, left hemisphere 54.2
2515 Male, age 75, right hemisphere 54.0
2701 Female, age 91, right hemisphere 52.5
Corticomedial amygdala
nTPM: 53.7
2429 Female, age 94, left hemisphere 56.1
2829 Male, age 80, left hemisphere 55.3
2428 Male, age 75, right hemisphere 55.0
2242 Female, age 91, right hemisphere 53.1
2535 Female, age 67, right hemisphere 52.5
2240 Male, age 76, both hemispheres 50.1
Lateral amygdala
nTPM: 54.9
2534 Female, age 94, left hemisphere 62.3
2255 Female, age 91, right hemisphere 56.5
1883 Male, age 76, both hemispheres 54.8
2516 Male, age 75, right hemisphere 54.5
2256 Male, age 80, left hemisphere 53.3
2830 Female, age 67, right hemisphere 47.9
Stria terminalis, bed nucleus
nTPM: 55.9
2486 Female, age 94, both hemispheres 58.4
1974 Female, age 91, both hemispheres 56.6
2201 Male, age 74, unknown 52.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 73.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 73.2
Samples: 152

Max nTPM: 120.7
Min nTPM: 38.7
Std nTPM: 17.1
Median nTPM: 70.6
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 120.7
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 114.6
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 112.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 112.2
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 112.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 109.5
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 107.5
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 107.2
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 104.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 103.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 103.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 46.1
FF:10151-102I7 76 years, female 46.1

AMYGDALA - Pig RNA-seqi
Average nTPM 37.1
Pig sample Sample description nTPM
Amygdala
nTPM: 37.1
Samples: 4

Max nTPM: 47.2
Min nTPM: 32.4
Sample A Female 47.2
Sample B Female 32.4
Sample C Male 35.8
Sample D Male 32.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 147.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 147.2
Samples: 4

Max nTPM: 152.3
Min nTPM: 142.3
Sample A Male 149.4
Sample B Male 152.3
Sample C Female 144.7
Sample D Female 142.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 6.8
67978711 Antisense, RP_040923_01_F07, Mouse strain C57BL/6J (56 days, male) 6.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.