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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:8.7 nTPM
HPA:8.7 nTPM
GTEx:16.8 nTPM
FANTOM5:24.8 Scaled Tags Per Million
Pig:16.9 nTPM
Mouse:45.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011564
Glial cells Medium
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.7
Sample id Sample description nTPM
Hippocampus
nTPM: 8.3
1855 Male, age 76, left hemisphere 8.9
2529 Female, age 94, left hemisphere 8.9
1898 Male, age 80, left hemisphere 8.4
1911 Female, age 85, right hemisphere 8.0
2148 Female, age 91, left hemisphere 7.8
2621 Female, age 67, right hemisphere 7.7
Dentate gyrus
nTPM: 8.4
2530 Female, age 94, left hemisphere 9.8
2246 Female, age 85, both hemispheres 8.8
2528 Male, age 74, both hemispheres 8.7
2531 Female, age 67, both hemispheres 8.4
2010 Male, age 76, both hemispheres 7.7
1927 Female, age 91, both hemispheres 6.8
Entorhinal gyrus
nTPM: 8.6
2613 Female, age 94, left hemisphere 9.7
2764 Male, age 80, right hemisphere 9.2
2117 Female, age 91, right hemisphere 8.8
1787 Male, age 76, left hemisphere 8.6
2686 Male, age 75, right hemisphere 7.8
1938 Female, age 85, left hemisphere 7.4
Hippocampus, CA1
nTPM: 8.0
2749 Male, age 80, left hemisphere 8.4
2082 Female, age 91, right hemisphere 8.2
2527 Male, age 74, both hemispheres 8.0
1873 Female, age 85, both hemispheres 7.7
2045 Male, age 76, both hemispheres 7.5
Hippocampus, CA2
nTPM: 8.3
1940 Female, age 85, left hemisphere 9.3
2113 Female, age 91, right hemisphere 8.9
2437 Female, age 94, left hemisphere 8.6
1963 Male, age 80, left hemisphere 7.9
2249 Male, age 74, both hemispheres 7.7
1892 Male, age 76, both hemispheres 7.6
Hippocampus, CA3
nTPM: 8.4
2436 Male, age 74, both hemispheres 9.1
2861 Female, age 67, both hemispheres 9.1
2620 Female, age 94, left hemisphere 8.8
2137 Male, age 80, left hemisphere 8.5
1891 Female, age 85, both hemispheres 8.1
1867 Male, age 76, both hemispheres 6.6
Parahippocampal cortex
nTPM: 8.1
2622 Female, age 67, right hemisphere 9.5
2250 Female, age 67, right hemisphere 8.9
2532 Female, age 72, left hemisphere 8.7
2693 Female, age 94, both hemispheres 8.3
2245 Female, age 91, both hemispheres 8.1
2018 Male, age 76, both hemispheres 7.9
1990 Female, age 91, right hemisphere 7.6
2692 Male, age 74, both hemispheres 7.6
1850 Male, age 80, both hemispheres 7.4
1933 Female, age 85, both hemispheres 7.4
Perirhinal gyrus
nTPM: 7.7
2848 Male, age 76, right hemisphere 8.5
2521 Female, age 94, right hemisphere 8.3
1794 Male, age 80, right hemisphere 7.9
1841 Female, age 85, right hemisphere 7.5
1847 Female, age 91, left hemisphere 6.3
Subiculum
nTPM: 8.7
2438 Female, age 94, left hemisphere 11.6
2619 Male, age 74, both hemispheres 9.4
2729 Female, age 91, right hemisphere 8.3
1977 Female, age 85, both hemispheres 8.0
1901 Male, age 80, both hemispheres 7.6
2042 Male, age 76, both hemispheres 7.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 35.9
Min nTPM: 6.6
Std nTPM: 4.0
Median nTPM: 16.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 35.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 29.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 26.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 24.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 24.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 24.6
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 24.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 24.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 24.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 24.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 23.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.8
FF:10153-102I9 76 years, female 27.7
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 21.1
Min nTPM: 11.7
Sample A Female 21.1
Sample B Female 14.8
Sample C Male 13.7
Sample D Male 11.7
Entorhinal cortex
nTPM: 16.9
Samples: 4

Max nTPM: 23.6
Min nTPM: 13.8
Sample A Female 15.7
Sample B Female 14.5
Sample C Male 23.6
Sample D Male 13.8
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 22.1
Min nTPM: 13.1
Sample A Female 22.1
Sample B Female 13.5
Sample C Male 14.0
Sample D Male 13.1
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 23.1
Min nTPM: 13.1
Sample A Female 17.0
Sample B Female 13.1
Sample C Male 23.1
Sample D Male 14.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.5
Samples: 4

Max nTPM: 48.4
Min nTPM: 42.2
Sample A Male 46.4
Sample B Male 42.2
Sample C Female 45.1
Sample D Female 48.4
Hippocampal formation
nTPM: 43.8
Samples: 4

Max nTPM: 47.2
Min nTPM: 39.6
Sample A Male 39.6
Sample B Male 44.1
Sample C Female 47.2
Sample D Female 44.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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