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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:19.7 nTPM
HPA:19.7 nTPM
GTEx:22.4 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:41.9 nTPM
Mouse:59.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047820
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 16.7
1898 Male, age 80, left hemisphere 20.5
2621 Female, age 67, right hemisphere 17.6
1855 Male, age 76, left hemisphere 17.3
2148 Female, age 91, left hemisphere 16.7
2529 Female, age 94, left hemisphere 15.9
1911 Female, age 85, right hemisphere 12.4
Dentate gyrus
nTPM: 18.3
2530 Female, age 94, left hemisphere 26.4
1927 Female, age 91, both hemispheres 20.1
2010 Male, age 76, both hemispheres 17.3
2246 Female, age 85, both hemispheres 17.0
2528 Male, age 74, both hemispheres 15.3
2531 Female, age 67, both hemispheres 13.9
Entorhinal gyrus
nTPM: 18.7
2764 Male, age 80, right hemisphere 22.3
2613 Female, age 94, left hemisphere 20.6
1787 Male, age 76, left hemisphere 19.1
1938 Female, age 85, left hemisphere 19.1
2686 Male, age 75, right hemisphere 16.2
2117 Female, age 91, right hemisphere 14.8
Hippocampus, CA1
nTPM: 16.8
1873 Female, age 85, both hemispheres 20.7
2749 Male, age 80, left hemisphere 20.5
2527 Male, age 74, both hemispheres 16.6
2082 Female, age 91, right hemisphere 14.2
2045 Male, age 76, both hemispheres 11.9
Hippocampus, CA2
nTPM: 18.5
1963 Male, age 80, left hemisphere 23.1
2437 Female, age 94, left hemisphere 23.0
1892 Male, age 76, both hemispheres 21.6
2249 Male, age 74, both hemispheres 15.2
1940 Female, age 85, left hemisphere 14.4
2113 Female, age 91, right hemisphere 14.0
Hippocampus, CA3
nTPM: 15.2
2861 Female, age 67, both hemispheres 18.2
2620 Female, age 94, left hemisphere 15.4
1891 Female, age 85, both hemispheres 14.8
2137 Male, age 80, left hemisphere 14.7
1867 Male, age 76, both hemispheres 14.5
2436 Male, age 74, both hemispheres 14.0
Parahippocampal cortex
nTPM: 18.2
1850 Male, age 80, both hemispheres 20.1
1933 Female, age 85, both hemispheres 20.0
2250 Female, age 67, right hemisphere 19.2
2532 Female, age 72, left hemisphere 18.7
1990 Female, age 91, right hemisphere 18.2
2245 Female, age 91, both hemispheres 18.2
2622 Female, age 67, right hemisphere 18.2
2693 Female, age 94, both hemispheres 17.9
2692 Male, age 74, both hemispheres 17.8
2018 Male, age 76, both hemispheres 14.1
Perirhinal gyrus
nTPM: 19.7
1847 Female, age 91, left hemisphere 23.4
1794 Male, age 80, right hemisphere 21.8
1841 Female, age 85, right hemisphere 19.3
2521 Female, age 94, right hemisphere 17.2
2848 Male, age 76, right hemisphere 16.9
Subiculum
nTPM: 16.1
2438 Female, age 94, left hemisphere 19.4
2619 Male, age 74, both hemispheres 18.9
1977 Female, age 85, both hemispheres 18.1
1901 Male, age 80, both hemispheres 14.6
2729 Female, age 91, right hemisphere 14.1
2042 Male, age 76, both hemispheres 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 60.5
Min nTPM: 4.9
Std nTPM: 11.2
Median nTPM: 19.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 60.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 60.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 55.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 55.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 51.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 49.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 48.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 46.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 45.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 43.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 43.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.7
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 14.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.8
Samples: 4

Max nTPM: 45.3
Min nTPM: 32.4
Sample A Female 45.3
Sample B Female 40.3
Sample C Male 37.2
Sample D Male 32.4
Entorhinal cortex
nTPM: 40.0
Samples: 4

Max nTPM: 44.0
Min nTPM: 35.5
Sample A Female 41.9
Sample B Female 38.4
Sample C Male 44.0
Sample D Male 35.5
Subiculum
nTPM: 41.3
Samples: 4

Max nTPM: 52.8
Min nTPM: 33.0
Sample A Female 52.8
Sample B Female 39.7
Sample C Male 39.7
Sample D Male 33.0
Ventral hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 56.9
Min nTPM: 32.7
Sample A Female 42.1
Sample B Female 32.7
Sample C Male 56.9
Sample D Male 35.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.4
Samples: 4

Max nTPM: 67.5
Min nTPM: 49.3
Sample A Male 49.3
Sample B Male 57.4
Sample C Female 67.5
Sample D Female 63.4
Hippocampal formation
nTPM: 50.9
Samples: 4

Max nTPM: 62.5
Min nTPM: 35.8
Sample A Male 62.5
Sample B Male 51.0
Sample C Female 35.8
Sample D Female 54.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70785006 Antisense, RP_050706_01_F08, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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