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ELP5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:21.0 nTPM
HPA:21.0 nTPM
GTEx:34.1 nTPM
FANTOM5:22.6 Scaled Tags Per Million
Pig:12.7 nTPM
Mouse:43.5 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023279
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.0
1898 Male, age 80, left hemisphere 21.6
2148 Female, age 91, left hemisphere 21.5
2621 Female, age 67, right hemisphere 21.4
1855 Male, age 76, left hemisphere 20.6
2529 Female, age 94, left hemisphere 20.6
1911 Female, age 85, right hemisphere 20.2
Dentate gyrus
nTPM: 20.6
1927 Female, age 91, both hemispheres 21.1
2530 Female, age 94, left hemisphere 21.0
2528 Male, age 74, both hemispheres 20.9
2010 Male, age 76, both hemispheres 20.6
2246 Female, age 85, both hemispheres 20.1
2531 Female, age 67, both hemispheres 20.1
Entorhinal gyrus
nTPM: 20.9
2613 Female, age 94, left hemisphere 21.6
2764 Male, age 80, right hemisphere 21.1
1938 Female, age 85, left hemisphere 21.0
1787 Male, age 76, left hemisphere 20.9
2686 Male, age 75, right hemisphere 20.6
2117 Female, age 91, right hemisphere 20.2
Hippocampus, CA1
nTPM: 20.5
2749 Male, age 80, left hemisphere 21.8
2527 Male, age 74, both hemispheres 20.9
2082 Female, age 91, right hemisphere 20.3
1873 Female, age 85, both hemispheres 20.1
2045 Male, age 76, both hemispheres 19.4
Hippocampus, CA2
nTPM: 20.7
1892 Male, age 76, both hemispheres 21.6
2437 Female, age 94, left hemisphere 20.9
1963 Male, age 80, left hemisphere 20.7
2249 Male, age 74, both hemispheres 20.6
2113 Female, age 91, right hemisphere 20.2
1940 Female, age 85, left hemisphere 19.9
Hippocampus, CA3
nTPM: 21.0
2861 Female, age 67, both hemispheres 21.7
2436 Male, age 74, both hemispheres 21.3
2137 Male, age 80, left hemisphere 21.0
1867 Male, age 76, both hemispheres 20.7
2620 Female, age 94, left hemisphere 20.7
1891 Female, age 85, both hemispheres 20.6
Parahippocampal cortex
nTPM: 20.6
2692 Male, age 74, both hemispheres 21.2
1850 Male, age 80, both hemispheres 21.1
2250 Female, age 67, right hemisphere 21.0
2245 Female, age 91, both hemispheres 20.9
2532 Female, age 72, left hemisphere 20.6
2622 Female, age 67, right hemisphere 20.6
2693 Female, age 94, both hemispheres 20.5
1933 Female, age 85, both hemispheres 20.4
1990 Female, age 91, right hemisphere 20.3
2018 Male, age 76, both hemispheres 19.9
Perirhinal gyrus
nTPM: 20.8
1847 Female, age 91, left hemisphere 21.9
1794 Male, age 80, right hemisphere 21.0
2848 Male, age 76, right hemisphere 20.5
2521 Female, age 94, right hemisphere 20.3
1841 Female, age 85, right hemisphere 20.1
Subiculum
nTPM: 20.9
1901 Male, age 80, both hemispheres 21.5
1977 Female, age 85, both hemispheres 21.4
2438 Female, age 94, left hemisphere 21.4
2619 Male, age 74, both hemispheres 21.0
2729 Female, age 91, right hemisphere 20.1
2042 Male, age 76, both hemispheres 19.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.1
Samples: 197

Max nTPM: 65.2
Min nTPM: 19.8
Std nTPM: 6.3
Median nTPM: 33.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 50.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 50.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 48.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 47.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 46.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 44.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 44.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 44.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 44.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.6
FF:10169-103B7 60 years, female 25.1
FF:10153-102I9 76 years, female 20.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.1
Min nTPM: 9.7
Sample A Female 13.1
Sample B Female 12.9
Sample C Male 12.5
Sample D Male 9.7
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 13.3
Min nTPM: 11.7
Sample A Female 13.0
Sample B Female 12.7
Sample C Male 13.3
Sample D Male 11.7
Subiculum
nTPM: 12.4
Samples: 4

Max nTPM: 15.5
Min nTPM: 10.3
Sample A Female 15.5
Sample B Female 12.2
Sample C Male 11.7
Sample D Male 10.3
Ventral hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 15.5
Min nTPM: 9.6
Sample A Female 11.5
Sample B Female 9.6
Sample C Male 15.5
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.6
Samples: 4

Max nTPM: 52.0
Min nTPM: 37.9
Sample A Male 37.9
Sample B Male 39.8
Sample C Female 44.5
Sample D Female 52.0
Hippocampal formation
nTPM: 42.5
Samples: 4

Max nTPM: 45.2
Min nTPM: 38.3
Sample A Male 44.4
Sample B Male 42.1
Sample C Female 45.2
Sample D Female 38.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
68269065 Antisense, RP_041208_01_H04, Mouse strain C57BL/6J (56 days, male) 7.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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