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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.2 nTPM
HPA:16.2 nTPM
GTEx:18.5 nTPM
FANTOM5:8.2 Scaled Tags Per Million
Pig:7.0 nTPM
Mouse:27.8 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.2
Sample id Sample description nTPM
Hippocampus
nTPM: 15.9
2148 Female, age 91, left hemisphere 16.3
1898 Male, age 80, left hemisphere 16.2
2529 Female, age 94, left hemisphere 16.1
1855 Male, age 76, left hemisphere 15.9
1911 Female, age 85, right hemisphere 15.7
2621 Female, age 67, right hemisphere 15.2
Dentate gyrus
nTPM: 16.2
2010 Male, age 76, both hemispheres 17.3
2530 Female, age 94, left hemisphere 17.1
2528 Male, age 74, both hemispheres 16.5
1927 Female, age 91, both hemispheres 16.0
2246 Female, age 85, both hemispheres 15.6
2531 Female, age 67, both hemispheres 15.0
Entorhinal gyrus
nTPM: 15.5
2117 Female, age 91, right hemisphere 16.2
2764 Male, age 80, right hemisphere 16.2
1787 Male, age 76, left hemisphere 16.0
2613 Female, age 94, left hemisphere 15.6
1938 Female, age 85, left hemisphere 15.0
2686 Male, age 75, right hemisphere 14.1
Hippocampus, CA1
nTPM: 15.9
2749 Male, age 80, left hemisphere 17.2
2527 Male, age 74, both hemispheres 16.4
2045 Male, age 76, both hemispheres 15.4
1873 Female, age 85, both hemispheres 15.2
2082 Female, age 91, right hemisphere 15.1
Hippocampus, CA2
nTPM: 16.0
1963 Male, age 80, left hemisphere 16.5
2249 Male, age 74, both hemispheres 16.3
2437 Female, age 94, left hemisphere 16.3
1892 Male, age 76, both hemispheres 16.1
1940 Female, age 85, left hemisphere 15.9
2113 Female, age 91, right hemisphere 14.9
Hippocampus, CA3
nTPM: 15.6
2436 Male, age 74, both hemispheres 16.7
1867 Male, age 76, both hemispheres 16.4
2620 Female, age 94, left hemisphere 15.5
2137 Male, age 80, left hemisphere 15.2
1891 Female, age 85, both hemispheres 14.9
2861 Female, age 67, both hemispheres 14.9
Parahippocampal cortex
nTPM: 15.1
1933 Female, age 85, both hemispheres 15.9
1990 Female, age 91, right hemisphere 15.7
2018 Male, age 76, both hemispheres 15.6
2250 Female, age 67, right hemisphere 15.5
2532 Female, age 72, left hemisphere 15.5
2692 Male, age 74, both hemispheres 14.9
2245 Female, age 91, both hemispheres 14.7
2622 Female, age 67, right hemisphere 14.7
2693 Female, age 94, both hemispheres 14.3
1850 Male, age 80, both hemispheres 14.2
Perirhinal gyrus
nTPM: 15.1
1794 Male, age 80, right hemisphere 16.5
1847 Female, age 91, left hemisphere 15.1
1841 Female, age 85, right hemisphere 15.0
2521 Female, age 94, right hemisphere 14.8
2848 Male, age 76, right hemisphere 13.9
Subiculum
nTPM: 15.4
2619 Male, age 74, both hemispheres 16.7
2729 Female, age 91, right hemisphere 16.6
1977 Female, age 85, both hemispheres 15.6
1901 Male, age 80, both hemispheres 15.4
2042 Male, age 76, both hemispheres 15.0
2438 Female, age 94, left hemisphere 13.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 197

Max nTPM: 34.1
Min nTPM: 9.3
Std nTPM: 3.9
Median nTPM: 18.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 32.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 26.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 26.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 26.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 26.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 26.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 25.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 25.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 25.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.2
FF:10153-102I9 76 years, female 10.2
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.0
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.0
Sample A Female 9.0
Sample B Female 6.2
Sample C Male 6.7
Sample D Male 6.0
Entorhinal cortex
nTPM: 6.5
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.7
Sample A Female 6.3
Sample B Female 6.1
Sample C Male 7.7
Sample D Male 5.7
Subiculum
nTPM: 6.3
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.4
Sample A Female 8.0
Sample B Female 5.4
Sample C Male 6.1
Sample D Male 5.8
Ventral hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 8.5
Min nTPM: 5.0
Sample A Female 7.3
Sample B Female 5.0
Sample C Male 8.5
Sample D Male 6.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 27.4
Min nTPM: 22.0
Sample A Male 23.8
Sample B Male 22.0
Sample C Female 27.4
Sample D Female 23.2
Hippocampal formation
nTPM: 27.8
Samples: 4

Max nTPM: 29.1
Min nTPM: 24.8
Sample A Male 29.1
Sample B Male 24.8
Sample C Female 28.8
Sample D Female 28.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
68080687 Antisense, RP_040929_01_E05, Mouse strain C57BL/6J (56 days, male) 0.8

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