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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:58.8 nTPM
HPA:58.8 nTPM
GTEx:53.0 nTPM
FANTOM5:155.5 Scaled Tags Per Million
Pig:81.5 nTPM
Mouse:141.4 nTPM
Allen mouse:5.8 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 58.8
Sample id Sample description nTPM
Amygdala
nTPM: 58.8
2514 Male, age 75, right hemisphere 67.5
2695 Female, age 67, right hemisphere 64.7
2517 Female, age 94, left hemisphere 55.1
1987 Female, age 91, left hemisphere 54.2
2814 Male, age 76, right hemisphere 52.5
Basal amygdala
nTPM: 53.0
2609 Male, age 75, right hemisphere 77.7
2243 Female, age 91, right hemisphere 56.7
2110 Male, age 80, left hemisphere 50.4
1955 Male, age 76, both hemispheres 48.3
2685 Female, age 94, left hemisphere 43.7
2827 Female, age 67, right hemisphere 41.3
Central amygdala
nTPM: 55.3
2515 Male, age 75, right hemisphere 66.4
2239 Male, age 80, left hemisphere 58.6
1905 Male, age 76, both hemispheres 52.0
2701 Female, age 91, right hemisphere 50.8
2826 Female, age 94, left hemisphere 48.8
Corticomedial amygdala
nTPM: 55.6
2428 Male, age 75, right hemisphere 77.7
2242 Female, age 91, right hemisphere 59.8
2829 Male, age 80, left hemisphere 55.1
2429 Female, age 94, left hemisphere 53.3
2240 Male, age 76, both hemispheres 44.7
2535 Female, age 67, right hemisphere 43.2
Lateral amygdala
nTPM: 54.3
2516 Male, age 75, right hemisphere 76.1
2256 Male, age 80, left hemisphere 51.9
2255 Female, age 91, right hemisphere 51.4
2830 Female, age 67, right hemisphere 51.2
1883 Male, age 76, both hemispheres 47.9
2534 Female, age 94, left hemisphere 47.2
Stria terminalis, bed nucleus
nTPM: 45.7
2201 Male, age 74, unknown 54.8
2486 Female, age 94, both hemispheres 42.9
1974 Female, age 91, both hemispheres 39.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 53.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 53.0
Samples: 152

Max nTPM: 153.4
Min nTPM: 14.9
Std nTPM: 22.7
Median nTPM: 49.2
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 153.4
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 127.0
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 113.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 109.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 108.6
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 107.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 99.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 98.6
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 96.0
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 91.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 90.2
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 155.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 155.5
FF:10151-102I7 76 years, female 155.5

AMYGDALA - Pig RNA-seqi
Average nTPM 81.5
Pig sample Sample description nTPM
Amygdala
nTPM: 81.5
Samples: 4

Max nTPM: 86.8
Min nTPM: 70.5
Sample A Female 86.3
Sample B Female 86.8
Sample C Male 82.4
Sample D Male 70.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 141.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 141.4
Samples: 4

Max nTPM: 161.1
Min nTPM: 127.0
Sample A Male 127.0
Sample B Male 131.9
Sample C Female 161.1
Sample D Female 145.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 5.8
69012705 Antisense, RP_050309_01_C09, Mouse strain C57BL/6J (56 days, male) 6.2
75043142 Antisense, RP_060220_02_G03, Mouse strain C57BL/6J (56 days, male) 5.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.