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NPTX1
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		103.100
RNA expressioni
Consensus:95.2 nTPM
HPA:95.2 nTPM
GTEx:27.2 nTPM
FANTOM5:150.7 Scaled Tags Per Million
Pig:55.3 nTPM
Mouse:88.4 nTPM
Allen mouse:10.8 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA077062
Amygdala mean intensity 103.100
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 103.100
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 102.007
Cortical amygdala 87.112
Central amygdala 85.698
Medial amygdaloid nucleus 72.216

AMYGDALA - HPA Brain RNA-seq
Max nTPM 95.2
Sample id Sample description nTPM
Amygdala
nTPM: 14.1
2517 Female, age 94, left hemisphere 37.6
1987 Female, age 91, left hemisphere 23.8
2514 Male, age 75, right hemisphere 9.2
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 71.8
2243 Female, age 91, right hemisphere 139.9
2685 Female, age 94, left hemisphere 88.6
2110 Male, age 80, left hemisphere 77.2
2827 Female, age 67, right hemisphere 72.2
2609 Male, age 75, right hemisphere 29.4
1955 Male, age 76, both hemispheres 23.3
Central amygdala
nTPM: 17.9
2239 Male, age 80, left hemisphere 58.9
2826 Female, age 94, left hemisphere 30.6
1905 Male, age 76, both hemispheres 0.0
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
Corticomedial amygdala
nTPM: 95.2
2242 Female, age 91, right hemisphere 164.3
2829 Male, age 80, left hemisphere 143.4
2535 Female, age 67, right hemisphere 128.9
2429 Female, age 94, left hemisphere 86.5
2240 Male, age 76, both hemispheres 25.1
2428 Male, age 75, right hemisphere 23.3
Lateral amygdala
nTPM: 21.2
2534 Female, age 94, left hemisphere 57.2
2256 Male, age 80, left hemisphere 46.1
2255 Female, age 91, right hemisphere 8.7
1883 Male, age 76, both hemispheres 7.9
2830 Female, age 67, right hemisphere 7.7
2516 Male, age 75, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 54.7
1974 Female, age 91, both hemispheres 94.8
2486 Female, age 94, both hemispheres 69.3
2201 Male, age 74, unknown 0.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 27.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 27.2
Samples: 152

Max nTPM: 200.3
Min nTPM: 0.6
Std nTPM: 30.6
Median nTPM: 17.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 200.3
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 147.5
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 146.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 100.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 99.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 98.9
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 88.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 81.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 80.2
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 73.8
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 73.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 150.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 150.7
FF:10151-102I7 76 years, female 150.7

AMYGDALA - Pig RNA-seqi
Average nTPM 55.3
Pig sample Sample description nTPM
Amygdala
nTPM: 55.3
Samples: 4

Max nTPM: 86.1
Min nTPM: 23.8
Sample A Female 86.1
Sample B Female 23.8
Sample C Male 46.2
Sample D Male 65.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 88.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 88.4
Samples: 4

Max nTPM: 89.4
Min nTPM: 85.9
Sample A Male 89.4
Sample B Male 89.2
Sample C Female 89.1
Sample D Female 85.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 10.8
71234666 Antisense, RP_050505_02_H05, Mouse strain C57BL/6J (56 days, male) 14.5
73520998 Antisense, RP_051101_02_H05, Mouse strain C57BL/6J (56 days, male) 7.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.