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PRNP
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:315.6 nTPM
HPA:315.6 nTPM
GTEx:225.2 nTPM
FANTOM5:840.6 Scaled Tags Per Million
Pig:24.2 nTPM
Mouse:908.0 nTPM
Allen mouse:18.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042754Antibody HPA043398
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 315.6
Sample id Sample description nTPM
Hippocampus
nTPM: 258.4
1898 Male, age 80, left hemisphere 292.8
1911 Female, age 85, right hemisphere 262.0
1855 Male, age 76, left hemisphere 260.3
2621 Female, age 67, right hemisphere 252.5
2148 Female, age 91, left hemisphere 242.3
2529 Female, age 94, left hemisphere 240.6
Dentate gyrus
nTPM: 260.3
1927 Female, age 91, both hemispheres 296.3
2246 Female, age 85, both hemispheres 269.8
2010 Male, age 76, both hemispheres 269.7
2528 Male, age 74, both hemispheres 266.1
2530 Female, age 94, left hemisphere 230.5
2531 Female, age 67, both hemispheres 229.6
Entorhinal gyrus
nTPM: 266.5
1938 Female, age 85, left hemisphere 298.7
2764 Male, age 80, right hemisphere 284.8
1787 Male, age 76, left hemisphere 275.0
2613 Female, age 94, left hemisphere 263.2
2117 Female, age 91, right hemisphere 261.7
2686 Male, age 75, right hemisphere 215.3
Hippocampus, CA1
nTPM: 281.9
2749 Male, age 80, left hemisphere 346.5
1873 Female, age 85, both hemispheres 275.8
2527 Male, age 74, both hemispheres 275.3
2045 Male, age 76, both hemispheres 262.0
2082 Female, age 91, right hemisphere 250.0
Hippocampus, CA2
nTPM: 269.6
1892 Male, age 76, both hemispheres 307.9
2249 Male, age 74, both hemispheres 286.0
1963 Male, age 80, left hemisphere 276.7
1940 Female, age 85, left hemisphere 259.5
2113 Female, age 91, right hemisphere 249.9
2437 Female, age 94, left hemisphere 237.5
Hippocampus, CA3
nTPM: 287.4
2137 Male, age 80, left hemisphere 351.3
2620 Female, age 94, left hemisphere 306.9
2436 Male, age 74, both hemispheres 304.1
1867 Male, age 76, both hemispheres 281.4
1891 Female, age 85, both hemispheres 259.9
2861 Female, age 67, both hemispheres 220.8
Parahippocampal cortex
nTPM: 271.3
1850 Male, age 80, both hemispheres 320.4
1933 Female, age 85, both hemispheres 285.8
1990 Female, age 91, right hemisphere 282.8
2250 Female, age 67, right hemisphere 277.3
2693 Female, age 94, both hemispheres 272.0
2532 Female, age 72, left hemisphere 267.5
2245 Female, age 91, both hemispheres 266.5
2018 Male, age 76, both hemispheres 259.1
2692 Male, age 74, both hemispheres 252.9
2622 Female, age 67, right hemisphere 228.9
Perirhinal gyrus
nTPM: 315.6
1794 Male, age 80, right hemisphere 337.4
1841 Female, age 85, right hemisphere 321.3
1847 Female, age 91, left hemisphere 318.6
2521 Female, age 94, right hemisphere 307.4
2848 Male, age 76, right hemisphere 293.4
Subiculum
nTPM: 260.9
1977 Female, age 85, both hemispheres 287.3
1901 Male, age 80, both hemispheres 281.6
2619 Male, age 74, both hemispheres 254.3
2042 Male, age 76, both hemispheres 250.7
2729 Female, age 91, right hemisphere 248.3
2438 Female, age 94, left hemisphere 243.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 225.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 225.2
Samples: 197

Max nTPM: 553.9
Min nTPM: 61.0
Std nTPM: 67.5
Median nTPM: 215.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 553.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 546.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 413.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 378.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 366.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 365.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 354.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 350.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 337.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 331.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 327.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 840.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 840.6
FF:10169-103B7 60 years, female 942.7
FF:10153-102I9 76 years, female 738.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 32.1
Min nTPM: 16.1
Sample A Female 32.1
Sample B Female 28.9
Sample C Male 19.9
Sample D Male 16.1
Entorhinal cortex
nTPM: 21.1
Samples: 4

Max nTPM: 23.8
Min nTPM: 18.7
Sample A Female 18.7
Sample B Female 23.8
Sample C Male 22.7
Sample D Male 19.0
Subiculum
nTPM: 19.2
Samples: 4

Max nTPM: 26.2
Min nTPM: 15.9
Sample A Female 26.2
Sample B Female 16.2
Sample C Male 18.5
Sample D Male 15.9
Ventral hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 29.6
Min nTPM: 15.2
Sample A Female 19.4
Sample B Female 15.2
Sample C Male 19.7
Sample D Male 29.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 908.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 831.8
Samples: 4

Max nTPM: 910.6
Min nTPM: 790.0
Sample A Male 790.0
Sample B Male 790.5
Sample C Female 836.2
Sample D Female 910.6
Hippocampal formation
nTPM: 908.0
Samples: 4

Max nTPM: 958.9
Min nTPM: 811.5
Sample A Male 958.9
Sample B Male 947.4
Sample C Female 914.3
Sample D Female 811.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
1405 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 18.5
1406 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 14.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.