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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:128.7 nTPM
HPA:128.7 nTPM
GTEx:98.8 nTPM
FANTOM5:74.3 Scaled Tags Per Million
Mouse:55.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052552
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.7
Sample id Sample description nTPM
Hippocampus
nTPM: 120.3
1898 Male, age 80, left hemisphere 127.1
2529 Female, age 94, left hemisphere 124.7
2148 Female, age 91, left hemisphere 121.0
2621 Female, age 67, right hemisphere 117.9
1855 Male, age 76, left hemisphere 117.2
1911 Female, age 85, right hemisphere 113.9
Dentate gyrus
nTPM: 120.1
1927 Female, age 91, both hemispheres 122.8
2530 Female, age 94, left hemisphere 121.5
2010 Male, age 76, both hemispheres 120.9
2528 Male, age 74, both hemispheres 120.9
2246 Female, age 85, both hemispheres 117.6
2531 Female, age 67, both hemispheres 117.1
Entorhinal gyrus
nTPM: 122.7
2764 Male, age 80, right hemisphere 129.6
1787 Male, age 76, left hemisphere 124.2
1938 Female, age 85, left hemisphere 123.8
2117 Female, age 91, right hemisphere 120.6
2613 Female, age 94, left hemisphere 120.4
2686 Male, age 75, right hemisphere 117.9
Hippocampus, CA1
nTPM: 122.4
2749 Male, age 80, left hemisphere 134.6
2527 Male, age 74, both hemispheres 122.7
1873 Female, age 85, both hemispheres 119.1
2045 Male, age 76, both hemispheres 119.1
2082 Female, age 91, right hemisphere 116.5
Hippocampus, CA2
nTPM: 121.7
1963 Male, age 80, left hemisphere 125.5
1892 Male, age 76, both hemispheres 125.0
2249 Male, age 74, both hemispheres 122.6
2437 Female, age 94, left hemisphere 120.6
1940 Female, age 85, left hemisphere 118.3
2113 Female, age 91, right hemisphere 118.1
Hippocampus, CA3
nTPM: 121.0
2436 Male, age 74, both hemispheres 127.9
2137 Male, age 80, left hemisphere 127.1
1867 Male, age 76, both hemispheres 119.8
1891 Female, age 85, both hemispheres 117.6
2620 Female, age 94, left hemisphere 116.8
2861 Female, age 67, both hemispheres 116.7
Parahippocampal cortex
nTPM: 122.4
1850 Male, age 80, both hemispheres 130.5
2250 Female, age 67, right hemisphere 126.6
2245 Female, age 91, both hemispheres 126.5
1990 Female, age 91, right hemisphere 125.3
1933 Female, age 85, both hemispheres 124.5
2018 Male, age 76, both hemispheres 120.7
2532 Female, age 72, left hemisphere 119.8
2693 Female, age 94, both hemispheres 118.2
2692 Male, age 74, both hemispheres 116.9
2622 Female, age 67, right hemisphere 114.6
Perirhinal gyrus
nTPM: 128.7
1847 Female, age 91, left hemisphere 135.4
1794 Male, age 80, right hemisphere 132.0
1841 Female, age 85, right hemisphere 127.9
2848 Male, age 76, right hemisphere 124.3
2521 Female, age 94, right hemisphere 123.7
Subiculum
nTPM: 119.8
1901 Male, age 80, both hemispheres 124.0
1977 Female, age 85, both hemispheres 123.9
2619 Male, age 74, both hemispheres 120.0
2438 Female, age 94, left hemisphere 118.5
2729 Female, age 91, right hemisphere 116.4
2042 Male, age 76, both hemispheres 116.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 98.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 98.8
Samples: 197

Max nTPM: 268.6
Min nTPM: 43.8
Std nTPM: 32.6
Median nTPM: 94.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 268.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 212.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 194.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 193.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 174.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 172.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 166.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 166.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 161.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 157.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 154.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.3
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 68.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.8
Samples: 4

Max nTPM: 61.7
Min nTPM: 43.3
Sample A Male 43.3
Sample B Male 61.7
Sample C Female 61.4
Sample D Female 56.6
Hippocampal formation
nTPM: 49.0
Samples: 4

Max nTPM: 57.5
Min nTPM: 45.0
Sample A Male 57.5
Sample B Male 45.0
Sample C Female 45.1
Sample D Female 48.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
74357594 Antisense, RP_060117_01_A09, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.