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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		37.515
RNA expressioni
Consensus:14.4 nTPM
HPA:14.4 nTPM
GTEx:16.0 nTPM
FANTOM5:36.1 Scaled Tags Per Million
Mouse:57.6 nTPM
Allen mouse:1.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA057790
Amygdala mean intensity 37.515
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 23.430
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 19.413
Cortical amygdala 37.515
Central amygdala 27.412
Medial amygdaloid nucleus 20.441

AMYGDALA - HPA Brain RNA-seq
Max nTPM 14.4
Sample id Sample description nTPM
Amygdala
nTPM: 14.4
1987 Female, age 91, left hemisphere 18.7
2514 Male, age 75, right hemisphere 16.6
2517 Female, age 94, left hemisphere 13.9
2695 Female, age 67, right hemisphere 11.9
2814 Male, age 76, right hemisphere 10.8
Basal amygdala
nTPM: 11.8
2609 Male, age 75, right hemisphere 15.3
2110 Male, age 80, left hemisphere 12.4
1955 Male, age 76, both hemispheres 12.0
2243 Female, age 91, right hemisphere 11.4
2685 Female, age 94, left hemisphere 10.9
2827 Female, age 67, right hemisphere 8.8
Central amygdala
nTPM: 13.3
2515 Male, age 75, right hemisphere 15.6
2701 Female, age 91, right hemisphere 13.9
2239 Male, age 80, left hemisphere 13.3
2826 Female, age 94, left hemisphere 13.0
1905 Male, age 76, both hemispheres 10.5
Corticomedial amygdala
nTPM: 12.7
2428 Male, age 75, right hemisphere 16.1
2242 Female, age 91, right hemisphere 13.6
2829 Male, age 80, left hemisphere 13.1
2240 Male, age 76, both hemispheres 12.6
2429 Female, age 94, left hemisphere 11.9
2535 Female, age 67, right hemisphere 8.7
Lateral amygdala
nTPM: 11.9
2516 Male, age 75, right hemisphere 14.5
2256 Male, age 80, left hemisphere 13.9
2255 Female, age 91, right hemisphere 12.0
2534 Female, age 94, left hemisphere 11.1
1883 Male, age 76, both hemispheres 10.9
2830 Female, age 67, right hemisphere 9.0
Stria terminalis, bed nucleus
nTPM: 10.2
2201 Male, age 74, unknown 11.8
1974 Female, age 91, both hemispheres 9.5
2486 Female, age 94, both hemispheres 9.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 16.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 16.0
Samples: 152

Max nTPM: 35.5
Min nTPM: 5.9
Std nTPM: 5.1
Median nTPM: 16.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 35.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 29.4
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 29.1
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 27.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 27.6
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 25.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 24.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 23.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 23.6
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 23.4
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 23.2
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 36.1
FF:10151-102I7 76 years, female 36.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 57.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 57.6
Samples: 4

Max nTPM: 64.0
Min nTPM: 51.1
Sample A Male 56.3
Sample B Male 51.1
Sample C Female 64.0
Sample D Female 59.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.3
72080065 Antisense, RP_051017_03_C02, Mouse strain C57BL/6J (56 days, male) 2.1
68920656 Antisense, RP_050303_01_A04, Mouse strain C57BL/6J (56 days, male) 1.2
70795772 Antisense, RP_050712_01_H12, Mouse strain C57BL/6J (56 days, male) 0.6
73512194 Antisense, RP_050712_01_H12, Mouse strain C57BL/6J (56 days, male) 0.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.