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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:64.6 nTPM
HPA:64.6 nTPM
GTEx:101.3 nTPM
FANTOM5:70.3 Scaled Tags Per Million
Pig:0.5 nTPM
Mouse:4.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038569
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.6
Sample id Sample description nTPM
Hippocampus
nTPM: 45.1
1911 Female, age 85, right hemisphere 59.5
2529 Female, age 94, left hemisphere 46.5
1898 Male, age 80, left hemisphere 46.2
2621 Female, age 67, right hemisphere 44.5
2148 Female, age 91, left hemisphere 37.4
1855 Male, age 76, left hemisphere 36.8
Dentate gyrus
nTPM: 48.7
2530 Female, age 94, left hemisphere 88.0
2010 Male, age 76, both hemispheres 50.0
2528 Male, age 74, both hemispheres 47.8
2246 Female, age 85, both hemispheres 38.3
2531 Female, age 67, both hemispheres 36.1
1927 Female, age 91, both hemispheres 31.8
Entorhinal gyrus
nTPM: 53.8
2117 Female, age 91, right hemisphere 82.8
2764 Male, age 80, right hemisphere 72.2
1938 Female, age 85, left hemisphere 44.5
2613 Female, age 94, left hemisphere 43.9
2686 Male, age 75, right hemisphere 42.8
1787 Male, age 76, left hemisphere 36.4
Hippocampus, CA1
nTPM: 37.9
1873 Female, age 85, both hemispheres 45.2
2527 Male, age 74, both hemispheres 43.3
2082 Female, age 91, right hemisphere 40.3
2749 Male, age 80, left hemisphere 38.4
2045 Male, age 76, both hemispheres 22.5
Hippocampus, CA2
nTPM: 48.4
1963 Male, age 80, left hemisphere 62.7
2249 Male, age 74, both hemispheres 58.4
1940 Female, age 85, left hemisphere 50.1
2437 Female, age 94, left hemisphere 49.3
2113 Female, age 91, right hemisphere 40.1
1892 Male, age 76, both hemispheres 29.8
Hippocampus, CA3
nTPM: 33.9
1891 Female, age 85, both hemispheres 61.8
1867 Male, age 76, both hemispheres 36.5
2436 Male, age 74, both hemispheres 32.3
2137 Male, age 80, left hemisphere 26.4
2620 Female, age 94, left hemisphere 25.2
2861 Female, age 67, both hemispheres 21.4
Parahippocampal cortex
nTPM: 39.1
2692 Male, age 74, both hemispheres 55.2
2532 Female, age 72, left hemisphere 52.0
1990 Female, age 91, right hemisphere 50.1
1850 Male, age 80, both hemispheres 41.7
1933 Female, age 85, both hemispheres 38.0
2018 Male, age 76, both hemispheres 36.4
2245 Female, age 91, both hemispheres 35.5
2693 Female, age 94, both hemispheres 32.4
2250 Female, age 67, right hemisphere 26.3
2622 Female, age 67, right hemisphere 23.3
Perirhinal gyrus
nTPM: 29.4
1794 Male, age 80, right hemisphere 35.8
2521 Female, age 94, right hemisphere 31.0
2848 Male, age 76, right hemisphere 30.1
1847 Female, age 91, left hemisphere 26.0
1841 Female, age 85, right hemisphere 24.2
Subiculum
nTPM: 64.6
2042 Male, age 76, both hemispheres 96.0
1901 Male, age 80, both hemispheres 81.2
1977 Female, age 85, both hemispheres 63.0
2619 Male, age 74, both hemispheres 51.9
2729 Female, age 91, right hemisphere 48.0
2438 Female, age 94, left hemisphere 47.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.3
Samples: 197

Max nTPM: 581.1
Min nTPM: 3.8
Std nTPM: 80.2
Median nTPM: 89.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 581.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 392.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 369.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 352.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 336.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 309.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 289.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 276.7
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 261.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 250.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 238.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.3
FF:10153-102I9 76 years, female 76.7
FF:10169-103B7 60 years, female 63.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.5
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.3
Sample A Female 0.6
Sample B Female 0.5
Sample C Male 0.7
Sample D Male 0.3
Entorhinal cortex
nTPM: 0.3
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.2
Sample A Female 0.5
Sample B Female 0.2
Sample C Male 0.4
Sample D Male 0.2
Subiculum
nTPM: 0.3
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.2
Sample A Female 0.3
Sample B Female 0.3
Sample C Male 0.2
Sample D Male 0.5
Ventral hippocampus
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.2
Sample A Female 0.5
Sample B Female 0.2
Sample C Male 0.4
Sample D Male 0.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.3
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.9
Sample A Male 3.7
Sample B Male 3.5
Sample C Female 3.0
Sample D Female 2.9
Hippocampal formation
nTPM: 4.4
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.2
Sample A Male 3.2
Sample B Male 3.8
Sample C Female 5.5
Sample D Female 5.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68157418 Antisense, RP_041116_02_F11, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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