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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:9.1 nTPM
HPA:9.1 nTPM
GTEx:7.2 nTPM
FANTOM5:27.9 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:12.1 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047164
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.1
Sample id Sample description nTPM
Hippocampus
nTPM: 9.1
2621 Female, age 67, right hemisphere 10.4
1911 Female, age 85, right hemisphere 9.5
1855 Male, age 76, left hemisphere 9.3
2529 Female, age 94, left hemisphere 9.2
2148 Female, age 91, left hemisphere 8.5
1898 Male, age 80, left hemisphere 7.7
Dentate gyrus
nTPM: 9.1
2531 Female, age 67, both hemispheres 11.8
2010 Male, age 76, both hemispheres 9.5
2246 Female, age 85, both hemispheres 8.8
1927 Female, age 91, both hemispheres 8.7
2530 Female, age 94, left hemisphere 8.5
2528 Male, age 74, both hemispheres 7.2
Entorhinal gyrus
nTPM: 8.2
1787 Male, age 76, left hemisphere 10.1
2764 Male, age 80, right hemisphere 9.5
2686 Male, age 75, right hemisphere 8.7
2613 Female, age 94, left hemisphere 8.0
1938 Female, age 85, left hemisphere 7.4
2117 Female, age 91, right hemisphere 5.7
Hippocampus, CA1
nTPM: 8.2
2045 Male, age 76, both hemispheres 10.0
2082 Female, age 91, right hemisphere 9.1
1873 Female, age 85, both hemispheres 8.7
2527 Male, age 74, both hemispheres 6.9
2749 Male, age 80, left hemisphere 6.4
Hippocampus, CA2
nTPM: 8.3
2437 Female, age 94, left hemisphere 8.8
2113 Female, age 91, right hemisphere 8.7
1940 Female, age 85, left hemisphere 8.4
1963 Male, age 80, left hemisphere 8.4
2249 Male, age 74, both hemispheres 8.0
1892 Male, age 76, both hemispheres 7.3
Hippocampus, CA3
nTPM: 8.3
2620 Female, age 94, left hemisphere 10.1
2861 Female, age 67, both hemispheres 9.4
1867 Male, age 76, both hemispheres 8.2
2436 Male, age 74, both hemispheres 7.7
1891 Female, age 85, both hemispheres 7.6
2137 Male, age 80, left hemisphere 7.0
Parahippocampal cortex
nTPM: 8.1
2018 Male, age 76, both hemispheres 11.2
2622 Female, age 67, right hemisphere 9.2
2692 Male, age 74, both hemispheres 8.6
2245 Female, age 91, both hemispheres 8.4
1990 Female, age 91, right hemisphere 8.1
2250 Female, age 67, right hemisphere 7.6
2693 Female, age 94, both hemispheres 7.6
2532 Female, age 72, left hemisphere 7.1
1933 Female, age 85, both hemispheres 6.8
1850 Male, age 80, both hemispheres 6.4
Perirhinal gyrus
nTPM: 7.1
2848 Male, age 76, right hemisphere 9.8
1794 Male, age 80, right hemisphere 6.9
2521 Female, age 94, right hemisphere 6.8
1847 Female, age 91, left hemisphere 6.4
1841 Female, age 85, right hemisphere 5.9
Subiculum
nTPM: 8.0
2042 Male, age 76, both hemispheres 9.5
1901 Male, age 80, both hemispheres 8.3
2619 Male, age 74, both hemispheres 7.9
2438 Female, age 94, left hemisphere 7.8
2729 Female, age 91, right hemisphere 7.7
1977 Female, age 85, both hemispheres 6.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.2
Samples: 197

Max nTPM: 22.5
Min nTPM: 3.2
Std nTPM: 2.2
Median nTPM: 6.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 17.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 12.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 12.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 12.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 12.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 12.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 11.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 11.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 11.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 10.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.9
FF:10153-102I9 76 years, female 37.1
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.6
Sample A Female 10.3
Sample B Female 8.6
Sample C Male 9.1
Sample D Male 9.6
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 9.7
Min nTPM: 8.8
Sample A Female 9.3
Sample B Female 9.3
Sample C Male 9.7
Sample D Male 8.8
Subiculum
nTPM: 9.5
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.2
Sample A Female 11.1
Sample B Female 9.2
Sample C Male 8.2
Sample D Male 9.3
Ventral hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.5
Sample A Female 8.5
Sample B Female 8.8
Sample C Male 10.8
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.5
Sample A Male 9.5
Sample B Male 12.6
Sample C Female 13.0
Sample D Female 10.2
Hippocampal formation
nTPM: 12.1
Samples: 4

Max nTPM: 14.5
Min nTPM: 9.9
Sample A Male 9.9
Sample B Male 10.6
Sample C Female 14.5
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68196962 Antisense, RP_040922_01_C09, Mouse strain C57BL/6J (56 days, male) 0.4

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