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EGFL7
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:96.9 nTPM
HPA:96.9 nTPM
GTEx:75.3 nTPM
FANTOM5:84.6 Scaled Tags Per Million
Pig:60.6 nTPM
Mouse:35.2 nTPM
Allen mouse:1.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 96.9
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 96.1
2666 Male, age 74, left hemisphere 121.8
2586 Male, age 75, left hemisphere 115.1
1827 Male, age 72, unknown 98.2
2828 Female, age 72, unknown 97.6
2411 Female, age 72, unknown 91.6
1870 Female, age 42, unknown 89.4
1833 Male, age 53, unknown 88.8
1830 Male, age 51, unknown 88.7
2019 Male, age 18, unknown 86.3
2219 Male, age 76, both hemispheres 83.3
Dorsal raphe nucleus
nTPM: 86.7
2750 Male, age 76, both hemispheres 91.0
2047 Male, age 72, unknown 90.9
1828 Male, age 53, unknown 89.0
2298 Female, age 72, unknown 82.5
2016 Female, age 72, unknown 80.0
Inferior colliculus
nTPM: 84.6
1848 Female, age 42, unknown 86.0
1890 Male, age 53, unknown 85.3
2849 Male, age 72, unknown 84.2
2097 Female, age 72, unknown 82.9
Median raphe nucleus
nTPM: 84.7
2220 Male, age 76, midline 84.7
Pedunculopontine tegmental nucleus
nTPM: 89.3
2334 Male, age 80, both hemispheres 93.2
2338 Male, age 61, both hemispheres 88.6
1921 Female, age 85, both hemispheres 86.2
Periaquaductal grey, anterior
nTPM: 96.9
1947 Male, age 18, unknown 107.7
1795 Male, age 51, unknown 96.6
2502 Female, age 75, unknown 86.5
Periaquaductal grey, dorsal
nTPM: 81.2
2464 Female, age 72, unknown 84.4
1831 Male, age 72, unknown 83.1
1840 Male, age 53, unknown 79.7
2850 Male, age 76, both hemispheres 77.6
Periaquaductal grey, lateral
nTPM: 78.9
2053 Male, age 18, unknown 82.9
2272 Male, age 74, both hemispheres 77.4
2140 Male, age 76, both hemispheres 76.3
Pretectal area
nTPM: 85.8
2007 Male, age 72, unknown 96.2
1816 Male, age 51, unknown 92.4
1944 Female, age 72, unknown 89.1
1815 Male, age 53, unknown 88.8
1817 Female, age 42, unknown 88.4
2825 Male, age 18, unknown 87.4
2667 Female, age 75, unknown 84.9
2316 Male, age 76, right hemisphere 84.8
2224 Female, age 72, unknown 81.9
2407 Male, age 75, both hemispheres 78.9
2273 Male, age 74, both hemispheres 70.6
Red nucleus
nTPM: 94.7
2588 Male, age 74, left hemisphere 125.2
2584 Male, age 75, left hemisphere 106.9
2725 Female, age 75, unknown 96.1
2823 Male, age 76, right hemisphere 92.8
1821 Female, age 72, unknown 92.7
2769 Male, age 72, unknown 92.7
1904 Male, age 53, unknown 91.3
2227 Male, age 72, unknown 90.4
1954 Female, age 42, unknown 89.4
1865 Male, age 51, unknown 88.0
2503 Female, age 72, unknown 86.6
2785 Male, age 18, unknown 84.8
Substantia nigra
nTPM: 94.2
2665 Male, age 74, both hemispheres 108.9
1916 Female, age 42, unknown 107.7
1851 Male, age 51, unknown 100.3
2583 Male, age 75, right hemisphere 94.4
1941 Male, age 53, unknown 92.7
1889 Female, age 72, unknown 91.4
2699 Male, age 18, unknown 88.4
2241 Male, age 72, unknown 87.8
2590 Female, age 75, unknown 85.4
2409 Female, age 72, unknown 85.2
Superior colliculus
nTPM: 88.6
2668 Female, age 75, unknown 105.4
1796 Male, age 53, unknown 92.8
2261 Male, age 18, unknown 92.0
2587 Male, age 74, left hemisphere 90.4
2087 Female, age 72, unknown 89.7
1895 Male, age 76, right hemisphere 87.2
1839 Male, age 51, unknown 86.6
2664 Male, age 75, both hemispheres 86.0
1995 Male, age 72, unknown 78.1
1913 Female, age 42, unknown 77.4
Ventral tegmental area
nTPM: 90.0
1915 Female, age 42, unknown 96.2
2410 Female, age 72, unknown 91.9
2218 Male, age 76, both hemispheres 91.4
1942 Male, age 51, unknown 87.6
2021 Male, age 53, unknown 86.4
2223 Female, age 72, unknown 86.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 75.3
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 75.3
Samples: 139

Max nTPM: 198.8
Min nTPM: 25.1
Std nTPM: 32.1
Median nTPM: 68.7
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 198.8
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 187.2
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 180.6
GTEX-1H23P-0011-R2a-SM-CKZP3 60-69 years, male 164.1
GTEX-13OW8-0011-R2a-SM-5L3G2 60-69 years, male 154.1
GTEX-1IL2U-0011-R2a-SM-ARU6V 60-69 years, male 145.6
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 136.6
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 133.7
GTEX-18464-0011-R2a-SM-731AL 50-59 years, male 128.2
GTEX-1J1OQ-0011-R2b-SM-ARU88 40-49 years, female 127.2
GTEX-XLM4-0011-R2B-SM-4AT5Z 60-69 years, male 125.6
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 84.6
FF:10158-103A5 76 years, female 84.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 60.6
Pig sample Sample description nTPM
Midbrain
nTPM: 47.2
Samples: 4

Max nTPM: 62.0
Min nTPM: 27.6
Sample A Female 27.6
Sample B Female 45.9
Sample C Male 62.0
Sample D Male 53.2
Periaqueductal gray
nTPM: 38.3
Samples: 3

Max nTPM: 46.9
Min nTPM: 28.4
Sample B Female 39.5
Sample C Male 46.9
Sample D Male 28.4
Substantia nigra
nTPM: 53.4
Samples: 4

Max nTPM: 72.7
Min nTPM: 33.9
Sample A Female 72.7
Sample B Female 47.5
Sample C Male 59.5
Sample D Male 33.9
Superior colliculi
nTPM: 60.6
Samples: 4

Max nTPM: 77.9
Min nTPM: 34.8
Sample A Female 77.9
Sample B Female 34.8
Sample C Male 73.9
Sample D Male 55.7

MIDBRAIN - Mouse RNA-seqi
Average nTPM 35.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 35.3
Samples: 4

Max nTPM: 42.5
Min nTPM: 30.6
Sample A Male 42.5
Sample B Male 31.6
Sample C Female 30.6
Sample D Female 36.3

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.2
532705 Antisense, RP_040825_01_F04, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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