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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:31.7 nTPM
HPA:31.7 nTPM
GTEx:53.2 nTPM
FANTOM5:25.6 Scaled Tags Per Million
Mouse:17.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027601
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.7
Sample id Sample description nTPM
Hippocampus
nTPM: 27.3
2529 Female, age 94, left hemisphere 33.5
1898 Male, age 80, left hemisphere 27.6
2621 Female, age 67, right hemisphere 26.4
1911 Female, age 85, right hemisphere 26.2
2148 Female, age 91, left hemisphere 25.5
1855 Male, age 76, left hemisphere 24.5
Dentate gyrus
nTPM: 27.5
2530 Female, age 94, left hemisphere 33.0
2528 Male, age 74, both hemispheres 29.2
2531 Female, age 67, both hemispheres 28.9
2010 Male, age 76, both hemispheres 27.8
2246 Female, age 85, both hemispheres 25.1
1927 Female, age 91, both hemispheres 20.9
Entorhinal gyrus
nTPM: 31.7
2117 Female, age 91, right hemisphere 38.5
2764 Male, age 80, right hemisphere 35.2
2613 Female, age 94, left hemisphere 31.8
2686 Male, age 75, right hemisphere 29.0
1787 Male, age 76, left hemisphere 28.9
1938 Female, age 85, left hemisphere 26.4
Hippocampus, CA1
nTPM: 23.6
2082 Female, age 91, right hemisphere 26.8
2527 Male, age 74, both hemispheres 25.9
2749 Male, age 80, left hemisphere 23.7
1873 Female, age 85, both hemispheres 22.6
2045 Male, age 76, both hemispheres 19.0
Hippocampus, CA2
nTPM: 27.3
2249 Male, age 74, both hemispheres 30.8
2437 Female, age 94, left hemisphere 30.7
1963 Male, age 80, left hemisphere 26.9
2113 Female, age 91, right hemisphere 26.8
1940 Female, age 85, left hemisphere 26.6
1892 Male, age 76, both hemispheres 21.8
Hippocampus, CA3
nTPM: 25.4
1891 Female, age 85, both hemispheres 27.7
2620 Female, age 94, left hemisphere 26.9
2861 Female, age 67, both hemispheres 25.8
2436 Male, age 74, both hemispheres 25.5
1867 Male, age 76, both hemispheres 24.2
2137 Male, age 80, left hemisphere 22.4
Parahippocampal cortex
nTPM: 26.4
1990 Female, age 91, right hemisphere 31.0
2532 Female, age 72, left hemisphere 30.5
2245 Female, age 91, both hemispheres 29.7
2692 Male, age 74, both hemispheres 29.3
2018 Male, age 76, both hemispheres 25.7
1933 Female, age 85, both hemispheres 25.2
2250 Female, age 67, right hemisphere 24.0
2693 Female, age 94, both hemispheres 23.8
1850 Male, age 80, both hemispheres 23.5
2622 Female, age 67, right hemisphere 21.1
Perirhinal gyrus
nTPM: 23.7
2521 Female, age 94, right hemisphere 28.4
1794 Male, age 80, right hemisphere 24.3
1847 Female, age 91, left hemisphere 23.9
2848 Male, age 76, right hemisphere 21.7
1841 Female, age 85, right hemisphere 20.4
Subiculum
nTPM: 31.5
2042 Male, age 76, both hemispheres 39.8
1901 Male, age 80, both hemispheres 34.2
1977 Female, age 85, both hemispheres 32.0
2438 Female, age 94, left hemisphere 29.6
2619 Male, age 74, both hemispheres 28.4
2729 Female, age 91, right hemisphere 25.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.2
Samples: 197

Max nTPM: 166.8
Min nTPM: 22.8
Std nTPM: 20.3
Median nTPM: 48.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 166.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 136.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 115.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 107.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 107.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 106.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 105.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 93.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 92.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 91.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 89.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.6
FF:10153-102I9 76 years, female 32.4
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 18.7
Min nTPM: 9.7
Sample A Male 18.7
Sample B Male 16.2
Sample C Female 14.8
Sample D Female 9.7
Hippocampal formation
nTPM: 17.5
Samples: 4

Max nTPM: 23.8
Min nTPM: 11.8
Sample A Male 11.8
Sample B Male 13.6
Sample C Female 23.8
Sample D Female 20.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70473945 Antisense, RP_050614_04_F02, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.