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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		90.743
RNA expressioni
Consensus:21.4 nTPM
HPA:21.4 nTPM
GTEx:19.0 nTPM
FANTOM5:20.8 Scaled Tags Per Million
Pig:15.1 nTPM
Mouse:15.2 nTPM
Allen mouse:1.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody CAB079018
Amygdala mean intensity 90.743
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 58.486
Basal medial amygdaloid nucleus 78.766
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 79.508
Cortical amygdala 68.558
Central amygdala 81.144
Medial amygdaloid nucleus 90.743

AMYGDALA - HPA Brain RNA-seq
Max nTPM 21.4
Sample id Sample description nTPM
Amygdala
nTPM: 19.9
2517 Female, age 94, left hemisphere 22.8
2514 Male, age 75, right hemisphere 21.1
2695 Female, age 67, right hemisphere 21.0
1987 Female, age 91, left hemisphere 20.7
2814 Male, age 76, right hemisphere 14.1
Basal amygdala
nTPM: 20.5
2243 Female, age 91, right hemisphere 23.4
2609 Male, age 75, right hemisphere 22.9
2110 Male, age 80, left hemisphere 20.0
2685 Female, age 94, left hemisphere 19.8
2827 Female, age 67, right hemisphere 19.6
1955 Male, age 76, both hemispheres 17.2
Central amygdala
nTPM: 20.6
2826 Female, age 94, left hemisphere 25.6
2239 Male, age 80, left hemisphere 21.0
2515 Male, age 75, right hemisphere 20.8
2701 Female, age 91, right hemisphere 19.7
1905 Male, age 76, both hemispheres 16.1
Corticomedial amygdala
nTPM: 20.4
2242 Female, age 91, right hemisphere 25.3
2428 Male, age 75, right hemisphere 22.5
2829 Male, age 80, left hemisphere 21.0
2535 Female, age 67, right hemisphere 18.5
2429 Female, age 94, left hemisphere 18.3
2240 Male, age 76, both hemispheres 16.7
Lateral amygdala
nTPM: 21.4
2830 Female, age 67, right hemisphere 24.3
2516 Male, age 75, right hemisphere 23.7
2256 Male, age 80, left hemisphere 21.9
2255 Female, age 91, right hemisphere 21.8
2534 Female, age 94, left hemisphere 21.8
1883 Male, age 76, both hemispheres 14.9
Stria terminalis, bed nucleus
nTPM: 18.6
2201 Male, age 74, unknown 23.1
1974 Female, age 91, both hemispheres 17.2
2486 Female, age 94, both hemispheres 15.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 19.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 19.0
Samples: 152

Max nTPM: 31.4
Min nTPM: 12.7
Std nTPM: 3.4
Median nTPM: 18.9
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 31.4
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 30.2
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 29.2
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 29.0
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 27.3
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 27.0
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 26.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 25.6
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 25.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 24.6
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 24.3
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 20.8
FF:10151-102I7 76 years, female 20.8

AMYGDALA - Pig RNA-seqi
Average nTPM 15.1
Pig sample Sample description nTPM
Amygdala
nTPM: 15.2
Samples: 4

Max nTPM: 18.5
Min nTPM: 13.2
Sample A Female 18.5
Sample B Female 13.2
Sample C Male 13.5
Sample D Male 15.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 15.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 15.2
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.0
Sample A Male 16.4
Sample B Male 16.4
Sample C Female 12.0
Sample D Female 15.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.3
70615583 Antisense, RP_050725_01_D01, Mouse strain C57BL/6J (56 days, male) 2.4
532733 Antisense, RP_040825_01_H07, Mouse strain C57BL/6J (56 days, male) 0.2

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.