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PPM1E
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:39.2 nTPM
HPA:39.2 nTPM
GTEx:10.6 nTPM
FANTOM5:145.8 Scaled Tags Per Million
Pig:78.2 nTPM
Mouse:142.3 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018462Antibody HPA019263
Glial cells MediumMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.2
Sample id Sample description nTPM
Hippocampus
nTPM: 24.1
1898 Male, age 80, left hemisphere 33.6
1855 Male, age 76, left hemisphere 30.3
2148 Female, age 91, left hemisphere 29.4
2621 Female, age 67, right hemisphere 27.8
1911 Female, age 85, right hemisphere 20.3
2529 Female, age 94, left hemisphere 3.3
Dentate gyrus
nTPM: 29.3
1927 Female, age 91, both hemispheres 64.2
2010 Male, age 76, both hemispheres 38.4
2531 Female, age 67, both hemispheres 23.0
2246 Female, age 85, both hemispheres 17.6
2528 Male, age 74, both hemispheres 16.4
2530 Female, age 94, left hemisphere 15.9
Entorhinal gyrus
nTPM: 3.6
1787 Male, age 76, left hemisphere 5.0
2613 Female, age 94, left hemisphere 5.0
1938 Female, age 85, left hemisphere 4.8
2764 Male, age 80, right hemisphere 4.5
2117 Female, age 91, right hemisphere 1.3
2686 Male, age 75, right hemisphere 1.1
Hippocampus, CA1
nTPM: 39.2
2749 Male, age 80, left hemisphere 83.1
2045 Male, age 76, both hemispheres 45.7
1873 Female, age 85, both hemispheres 42.5
2527 Male, age 74, both hemispheres 18.2
2082 Female, age 91, right hemisphere 6.4
Hippocampus, CA2
nTPM: 20.5
1963 Male, age 80, left hemisphere 46.7
1892 Male, age 76, both hemispheres 46.4
2249 Male, age 74, both hemispheres 12.9
2437 Female, age 94, left hemisphere 7.4
2113 Female, age 91, right hemisphere 5.9
1940 Female, age 85, left hemisphere 4.0
Hippocampus, CA3
nTPM: 28.1
2137 Male, age 80, left hemisphere 57.8
1867 Male, age 76, both hemispheres 33.7
2620 Female, age 94, left hemisphere 27.7
2861 Female, age 67, both hemispheres 21.6
1891 Female, age 85, both hemispheres 15.3
2436 Male, age 74, both hemispheres 12.5
Parahippocampal cortex
nTPM: 4.9
2245 Female, age 91, both hemispheres 13.9
2250 Female, age 67, right hemisphere 7.1
1990 Female, age 91, right hemisphere 6.4
1933 Female, age 85, both hemispheres 5.1
2018 Male, age 76, both hemispheres 4.6
1850 Male, age 80, both hemispheres 4.5
2693 Female, age 94, both hemispheres 4.5
2692 Male, age 74, both hemispheres 1.2
2622 Female, age 67, right hemisphere 0.6
2532 Female, age 72, left hemisphere 0.5
Perirhinal gyrus
nTPM: 5.9
1847 Female, age 91, left hemisphere 12.3
2521 Female, age 94, right hemisphere 8.1
2848 Male, age 76, right hemisphere 3.4
1794 Male, age 80, right hemisphere 3.2
1841 Female, age 85, right hemisphere 2.4
Subiculum
nTPM: 10.6
1901 Male, age 80, both hemispheres 23.8
2729 Female, age 91, right hemisphere 13.9
2042 Male, age 76, both hemispheres 11.5
1977 Female, age 85, both hemispheres 6.3
2438 Female, age 94, left hemisphere 5.9
2619 Male, age 74, both hemispheres 2.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.6
Samples: 197

Max nTPM: 49.3
Min nTPM: 0.4
Std nTPM: 10.1
Median nTPM: 6.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 49.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 47.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 43.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 38.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 37.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 36.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 36.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 36.3
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 34.1
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 31.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 145.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 145.8
FF:10169-103B7 60 years, female 222.8
FF:10153-102I9 76 years, female 68.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 78.2
Samples: 4

Max nTPM: 96.5
Min nTPM: 63.4
Sample A Female 96.5
Sample B Female 81.6
Sample C Male 63.4
Sample D Male 71.2
Entorhinal cortex
nTPM: 34.2
Samples: 4

Max nTPM: 36.7
Min nTPM: 32.1
Sample A Female 33.3
Sample B Female 34.7
Sample C Male 36.7
Sample D Male 32.1
Subiculum
nTPM: 47.7
Samples: 4

Max nTPM: 53.6
Min nTPM: 44.6
Sample A Female 53.6
Sample B Female 44.6
Sample C Male 47.4
Sample D Male 45.0
Ventral hippocampus
nTPM: 59.7
Samples: 4

Max nTPM: 76.6
Min nTPM: 45.9
Sample A Female 64.1
Sample B Female 45.9
Sample C Male 52.2
Sample D Male 76.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 142.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 80.4
Samples: 4

Max nTPM: 88.8
Min nTPM: 69.7
Sample A Male 77.6
Sample B Male 69.7
Sample C Female 88.8
Sample D Female 85.6
Hippocampal formation
nTPM: 142.3
Samples: 4

Max nTPM: 180.5
Min nTPM: 114.1
Sample A Male 118.3
Sample B Male 156.2
Sample C Female 180.5
Sample D Female 114.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
100144389 Antisense, RP_110407_02_A03, Mouse strain C57BL/6J (56 days, male) 11.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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