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ATG13
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:55.2 nTPM
HPA:55.2 nTPM
GTEx:45.3 nTPM
FANTOM5:55.8 Scaled Tags Per Million
Pig:32.0 nTPM
Mouse:40.3 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.2
Sample id Sample description nTPM
Hippocampus
nTPM: 49.3
2148 Female, age 91, left hemisphere 54.9
1911 Female, age 85, right hemisphere 50.3
2621 Female, age 67, right hemisphere 49.6
2529 Female, age 94, left hemisphere 49.5
1898 Male, age 80, left hemisphere 47.1
1855 Male, age 76, left hemisphere 44.4
Dentate gyrus
nTPM: 49.4
2531 Female, age 67, both hemispheres 55.7
2530 Female, age 94, left hemisphere 51.4
2528 Male, age 74, both hemispheres 49.3
2246 Female, age 85, both hemispheres 48.9
1927 Female, age 91, both hemispheres 48.8
2010 Male, age 76, both hemispheres 42.0
Entorhinal gyrus
nTPM: 55.2
2764 Male, age 80, right hemisphere 64.5
2613 Female, age 94, left hemisphere 57.6
2117 Female, age 91, right hemisphere 56.4
1938 Female, age 85, left hemisphere 52.8
2686 Male, age 75, right hemisphere 51.4
1787 Male, age 76, left hemisphere 48.8
Hippocampus, CA1
nTPM: 49.6
2082 Female, age 91, right hemisphere 54.2
2749 Male, age 80, left hemisphere 52.3
2527 Male, age 74, both hemispheres 48.1
2045 Male, age 76, both hemispheres 47.0
1873 Female, age 85, both hemispheres 46.5
Hippocampus, CA2
nTPM: 50.0
1963 Male, age 80, left hemisphere 53.4
2113 Female, age 91, right hemisphere 52.3
2437 Female, age 94, left hemisphere 51.9
1940 Female, age 85, left hemisphere 51.0
2249 Male, age 74, both hemispheres 47.3
1892 Male, age 76, both hemispheres 44.2
Hippocampus, CA3
nTPM: 52.2
2620 Female, age 94, left hemisphere 60.4
2861 Female, age 67, both hemispheres 57.9
1891 Female, age 85, both hemispheres 52.4
2137 Male, age 80, left hemisphere 51.6
1867 Male, age 76, both hemispheres 45.5
2436 Male, age 74, both hemispheres 45.3
Parahippocampal cortex
nTPM: 51.4
2692 Male, age 74, both hemispheres 54.9
1850 Male, age 80, both hemispheres 53.6
2622 Female, age 67, right hemisphere 53.5
2693 Female, age 94, both hemispheres 53.4
1933 Female, age 85, both hemispheres 52.9
1990 Female, age 91, right hemisphere 52.9
2532 Female, age 72, left hemisphere 49.5
2018 Male, age 76, both hemispheres 48.5
2245 Female, age 91, both hemispheres 48.4
2250 Female, age 67, right hemisphere 46.2
Perirhinal gyrus
nTPM: 50.1
1794 Male, age 80, right hemisphere 54.4
2521 Female, age 94, right hemisphere 50.3
1847 Female, age 91, left hemisphere 49.9
1841 Female, age 85, right hemisphere 49.4
2848 Male, age 76, right hemisphere 46.7
Subiculum
nTPM: 50.9
1901 Male, age 80, both hemispheres 57.7
1977 Female, age 85, both hemispheres 53.7
2042 Male, age 76, both hemispheres 51.5
2619 Male, age 74, both hemispheres 49.5
2729 Female, age 91, right hemisphere 49.2
2438 Female, age 94, left hemisphere 43.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.3
Samples: 197

Max nTPM: 91.1
Min nTPM: 22.9
Std nTPM: 10.6
Median nTPM: 43.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 91.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 82.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 79.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 79.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 77.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 77.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 76.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 69.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 68.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 65.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 65.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.8
FF:10153-102I9 76 years, female 70.9
FF:10169-103B7 60 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 34.8
Min nTPM: 22.2
Sample A Female 34.8
Sample B Female 31.1
Sample C Male 30.7
Sample D Male 22.2
Entorhinal cortex
nTPM: 32.0
Samples: 4

Max nTPM: 35.4
Min nTPM: 28.2
Sample A Female 35.4
Sample B Female 33.0
Sample C Male 31.4
Sample D Male 28.2
Subiculum
nTPM: 29.5
Samples: 4

Max nTPM: 38.3
Min nTPM: 24.3
Sample A Female 38.3
Sample B Female 27.8
Sample C Male 27.7
Sample D Male 24.3
Ventral hippocampus
nTPM: 29.3
Samples: 4

Max nTPM: 36.1
Min nTPM: 22.6
Sample A Female 27.2
Sample B Female 22.6
Sample C Male 36.1
Sample D Male 31.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 42.3
Min nTPM: 37.9
Sample A Male 41.2
Sample B Male 39.9
Sample C Female 37.9
Sample D Female 42.3
Hippocampal formation
nTPM: 36.9
Samples: 4

Max nTPM: 39.5
Min nTPM: 35.2
Sample A Male 35.9
Sample B Male 37.1
Sample C Female 39.5
Sample D Female 35.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
68158078 Antisense, RP_041116_02_G07, Mouse strain C57BL/6J (56 days, male) 7.9

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The Human Protein Atlas

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