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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:41.9 nTPM
HPA:41.9 nTPM
GTEx:41.2 nTPM
FANTOM5:37.9 Scaled Tags Per Million
Pig:4.7 nTPM
Mouse:7.4 nTPM
Allen mouse:1.1 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 41.9
Sample id Sample description nTPM
Amygdala
nTPM: 41.9
2695 Female, age 67, right hemisphere 53.4
1987 Female, age 91, left hemisphere 43.9
2814 Male, age 76, right hemisphere 40.9
2514 Male, age 75, right hemisphere 36.6
2517 Female, age 94, left hemisphere 34.5
Basal amygdala
nTPM: 38.6
2609 Male, age 75, right hemisphere 46.2
2243 Female, age 91, right hemisphere 44.7
1955 Male, age 76, both hemispheres 40.6
2685 Female, age 94, left hemisphere 34.0
2110 Male, age 80, left hemisphere 33.9
2827 Female, age 67, right hemisphere 31.8
Central amygdala
nTPM: 40.4
2515 Male, age 75, right hemisphere 43.3
1905 Male, age 76, both hemispheres 42.6
2701 Female, age 91, right hemisphere 41.8
2826 Female, age 94, left hemisphere 37.3
2239 Male, age 80, left hemisphere 36.8
Corticomedial amygdala
nTPM: 36.8
2242 Female, age 91, right hemisphere 41.7
2428 Male, age 75, right hemisphere 40.0
2240 Male, age 76, both hemispheres 37.2
2829 Male, age 80, left hemisphere 34.9
2535 Female, age 67, right hemisphere 34.1
2429 Female, age 94, left hemisphere 32.9
Lateral amygdala
nTPM: 38.7
2255 Female, age 91, right hemisphere 43.1
2516 Male, age 75, right hemisphere 42.2
2256 Male, age 80, left hemisphere 41.7
1883 Male, age 76, both hemispheres 36.3
2534 Female, age 94, left hemisphere 35.2
2830 Female, age 67, right hemisphere 33.8
Stria terminalis, bed nucleus
nTPM: 33.0
2201 Male, age 74, unknown 38.3
2486 Female, age 94, both hemispheres 31.4
1974 Female, age 91, both hemispheres 29.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 41.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 41.2
Samples: 152

Max nTPM: 132.7
Min nTPM: 3.4
Std nTPM: 21.0
Median nTPM: 37.5
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 132.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 113.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 106.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 102.5
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 94.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 91.4
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 86.3
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 79.9
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 79.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 76.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 74.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 37.9
FF:10151-102I7 76 years, female 37.9

AMYGDALA - Pig RNA-seqi
Average nTPM 4.7
Pig sample Sample description nTPM
Amygdala
nTPM: 4.7
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.1
Sample A Female 4.1
Sample B Female 5.6
Sample C Male 4.7
Sample D Male 4.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 7.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 7.4
Samples: 4

Max nTPM: 8.6
Min nTPM: 5.6
Sample A Male 5.6
Sample B Male 8.6
Sample C Female 8.6
Sample D Female 6.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.1
69170204 Antisense, RP_050321_04_G10, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.