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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.9 nTPM
HPA:8.9 nTPM
GTEx:26.6 nTPM
FANTOM5:20.6 Scaled Tags Per Million
Pig:6.4 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.9
Sample id Sample description nTPM
Hippocampus
nTPM: 8.4
2148 Female, age 91, left hemisphere 10.0
2529 Female, age 94, left hemisphere 9.8
2621 Female, age 67, right hemisphere 9.2
1911 Female, age 85, right hemisphere 8.2
1898 Male, age 80, left hemisphere 6.7
1855 Male, age 76, left hemisphere 6.6
Dentate gyrus
nTPM: 8.0
2531 Female, age 67, both hemispheres 10.2
2530 Female, age 94, left hemisphere 8.4
2528 Male, age 74, both hemispheres 7.9
2246 Female, age 85, both hemispheres 7.7
1927 Female, age 91, both hemispheres 6.9
2010 Male, age 76, both hemispheres 6.8
Entorhinal gyrus
nTPM: 8.3
2613 Female, age 94, left hemisphere 10.0
2686 Male, age 75, right hemisphere 10.0
2764 Male, age 80, right hemisphere 8.7
2117 Female, age 91, right hemisphere 7.2
1787 Male, age 76, left hemisphere 7.1
1938 Female, age 85, left hemisphere 6.8
Hippocampus, CA1
nTPM: 7.6
2082 Female, age 91, right hemisphere 9.2
1873 Female, age 85, both hemispheres 7.5
2045 Male, age 76, both hemispheres 7.2
2749 Male, age 80, left hemisphere 7.2
2527 Male, age 74, both hemispheres 7.1
Hippocampus, CA2
nTPM: 7.3
2437 Female, age 94, left hemisphere 8.3
2113 Female, age 91, right hemisphere 8.2
2249 Male, age 74, both hemispheres 7.3
1963 Male, age 80, left hemisphere 7.0
1940 Female, age 85, left hemisphere 6.9
1892 Male, age 76, both hemispheres 6.2
Hippocampus, CA3
nTPM: 8.9
2861 Female, age 67, both hemispheres 11.5
2620 Female, age 94, left hemisphere 10.8
2436 Male, age 74, both hemispheres 8.4
2137 Male, age 80, left hemisphere 7.9
1891 Female, age 85, both hemispheres 7.8
1867 Male, age 76, both hemispheres 6.8
Parahippocampal cortex
nTPM: 8.1
2692 Male, age 74, both hemispheres 10.3
2622 Female, age 67, right hemisphere 9.4
2693 Female, age 94, both hemispheres 8.9
2532 Female, age 72, left hemisphere 8.4
2245 Female, age 91, both hemispheres 8.3
1990 Female, age 91, right hemisphere 7.6
2250 Female, age 67, right hemisphere 7.6
1850 Male, age 80, both hemispheres 7.4
2018 Male, age 76, both hemispheres 6.9
1933 Female, age 85, both hemispheres 6.1
Perirhinal gyrus
nTPM: 6.7
2521 Female, age 94, right hemisphere 7.5
1794 Male, age 80, right hemisphere 6.6
2848 Male, age 76, right hemisphere 6.6
1841 Female, age 85, right hemisphere 6.5
1847 Female, age 91, left hemisphere 6.1
Subiculum
nTPM: 7.3
2619 Male, age 74, both hemispheres 10.0
2729 Female, age 91, right hemisphere 8.2
2042 Male, age 76, both hemispheres 7.1
1977 Female, age 85, both hemispheres 6.8
1901 Male, age 80, both hemispheres 6.6
2438 Female, age 94, left hemisphere 4.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.6
Samples: 197

Max nTPM: 83.2
Min nTPM: 8.4
Std nTPM: 8.9
Median nTPM: 24.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 83.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 61.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 51.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 49.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 47.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 46.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 46.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 45.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 42.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 42.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 41.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.6
FF:10153-102I9 76 years, female 24.6
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.4
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.3
Sample A Female 7.4
Sample B Female 6.0
Sample C Male 6.8
Sample D Male 5.3
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.0
Sample A Female 6.1
Sample B Female 5.8
Sample C Male 6.4
Sample D Male 5.0
Subiculum
nTPM: 6.3
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.6
Sample A Female 7.5
Sample B Female 6.5
Sample C Male 5.6
Sample D Male 5.7
Ventral hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.6
Sample A Female 6.1
Sample B Female 5.6
Sample C Male 7.2
Sample D Male 6.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.