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PAAF1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:80.3 nTPM
HPA:80.3 nTPM
GTEx:78.1 nTPM
FANTOM5:30.9 Scaled Tags Per Million
Pig:12.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039952
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 80.3
Sample id Sample description nTPM
Hippocampus
nTPM: 77.6
2529 Female, age 94, left hemisphere 78.5
2148 Female, age 91, left hemisphere 78.4
2621 Female, age 67, right hemisphere 78.4
1911 Female, age 85, right hemisphere 77.7
1898 Male, age 80, left hemisphere 76.5
1855 Male, age 76, left hemisphere 75.9
Dentate gyrus
nTPM: 78.3
2530 Female, age 94, left hemisphere 84.4
2010 Male, age 76, both hemispheres 79.2
2531 Female, age 67, both hemispheres 77.9
2246 Female, age 85, both hemispheres 77.8
2528 Male, age 74, both hemispheres 76.0
1927 Female, age 91, both hemispheres 74.6
Entorhinal gyrus
nTPM: 80.3
2686 Male, age 75, right hemisphere 83.7
2117 Female, age 91, right hemisphere 82.8
2764 Male, age 80, right hemisphere 79.6
1938 Female, age 85, left hemisphere 79.2
2613 Female, age 94, left hemisphere 78.3
1787 Male, age 76, left hemisphere 78.0
Hippocampus, CA1
nTPM: 78.0
2045 Male, age 76, both hemispheres 81.3
2082 Female, age 91, right hemisphere 80.1
2527 Male, age 74, both hemispheres 76.3
2749 Male, age 80, left hemisphere 76.2
1873 Female, age 85, both hemispheres 76.0
Hippocampus, CA2
nTPM: 77.5
1963 Male, age 80, left hemisphere 79.4
2113 Female, age 91, right hemisphere 79.3
1940 Female, age 85, left hemisphere 77.9
2437 Female, age 94, left hemisphere 77.2
1892 Male, age 76, both hemispheres 76.6
2249 Male, age 74, both hemispheres 74.7
Hippocampus, CA3
nTPM: 76.4
1891 Female, age 85, both hemispheres 79.9
1867 Male, age 76, both hemispheres 77.3
2620 Female, age 94, left hemisphere 77.0
2137 Male, age 80, left hemisphere 75.8
2861 Female, age 67, both hemispheres 75.8
2436 Male, age 74, both hemispheres 72.8
Parahippocampal cortex
nTPM: 79.2
2692 Male, age 74, both hemispheres 83.6
2532 Female, age 72, left hemisphere 80.7
1850 Male, age 80, both hemispheres 80.5
2018 Male, age 76, both hemispheres 80.4
2622 Female, age 67, right hemisphere 79.8
1990 Female, age 91, right hemisphere 79.3
1933 Female, age 85, both hemispheres 78.4
2693 Female, age 94, both hemispheres 77.7
2245 Female, age 91, both hemispheres 77.6
2250 Female, age 67, right hemisphere 73.9
Perirhinal gyrus
nTPM: 78.2
2848 Male, age 76, right hemisphere 79.4
1847 Female, age 91, left hemisphere 78.5
1841 Female, age 85, right hemisphere 78.2
1794 Male, age 80, right hemisphere 78.1
2521 Female, age 94, right hemisphere 76.8
Subiculum
nTPM: 80.0
1901 Male, age 80, both hemispheres 81.1
1977 Female, age 85, both hemispheres 80.8
2042 Male, age 76, both hemispheres 80.5
2729 Female, age 91, right hemisphere 80.2
2438 Female, age 94, left hemisphere 79.6
2619 Male, age 74, both hemispheres 77.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.1
Samples: 197

Max nTPM: 230.6
Min nTPM: 29.8
Std nTPM: 27.0
Median nTPM: 73.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 230.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 169.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 164.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 159.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 155.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 149.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 145.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 139.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 138.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 132.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 122.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.9
FF:10153-102I9 76 years, female 31.6
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 9.8
Sample A Female 16.3
Sample B Female 14.1
Sample C Male 11.6
Sample D Male 9.8
Entorhinal cortex
nTPM: 11.2
Samples: 4

Max nTPM: 13.2
Min nTPM: 8.3
Sample A Female 12.3
Sample B Female 13.2
Sample C Male 11.0
Sample D Male 8.3
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 14.4
Min nTPM: 9.1
Sample A Female 14.4
Sample B Female 10.3
Sample C Male 9.1
Sample D Male 9.4
Ventral hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.9
Sample A Female 12.4
Sample B Female 9.9
Sample C Male 12.6
Sample D Male 11.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.