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CLK2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.7 nTPM
HPA:11.7 nTPM
GTEx:11.1 nTPM
FANTOM5:35.2 Scaled Tags Per Million
Pig:7.8 nTPM
Mouse:12.0 nTPM
Allen mouse:7.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 11.7
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 11.2
1870 Female, age 42, unknown 11.9
2586 Male, age 75, left hemisphere 11.9
1827 Male, age 72, unknown 11.8
1833 Male, age 53, unknown 11.8
1830 Male, age 51, unknown 11.4
2828 Female, age 72, unknown 11.2
2019 Male, age 18, unknown 11.0
2411 Female, age 72, unknown 10.3
2666 Male, age 74, left hemisphere 10.2
2219 Male, age 76, both hemispheres 10.1
Dorsal raphe nucleus
nTPM: 10.7
1828 Male, age 53, unknown 10.9
2298 Female, age 72, unknown 10.9
2016 Female, age 72, unknown 10.7
2750 Male, age 76, both hemispheres 10.6
2047 Male, age 72, unknown 10.4
Inferior colliculus
nTPM: 11.3
2849 Male, age 72, unknown 12.1
1890 Male, age 53, unknown 11.6
1848 Female, age 42, unknown 11.3
2097 Female, age 72, unknown 10.1
Median raphe nucleus
nTPM: 10.8
2220 Male, age 76, midline 10.8
Pedunculopontine tegmental nucleus
nTPM: 11.5
2338 Male, age 61, both hemispheres 12.1
2334 Male, age 80, both hemispheres 12.0
1921 Female, age 85, both hemispheres 10.3
Periaquaductal grey, anterior
nTPM: 10.6
1795 Male, age 51, unknown 10.9
1947 Male, age 18, unknown 10.9
2502 Female, age 75, unknown 9.9
Periaquaductal grey, dorsal
nTPM: 11.2
1831 Male, age 72, unknown 12.0
2464 Female, age 72, unknown 11.1
1840 Male, age 53, unknown 10.9
2850 Male, age 76, both hemispheres 10.7
Periaquaductal grey, lateral
nTPM: 10.9
2272 Male, age 74, both hemispheres 11.4
2140 Male, age 76, both hemispheres 10.7
2053 Male, age 18, unknown 10.6
Pretectal area
nTPM: 11.0
2407 Male, age 75, both hemispheres 12.2
1815 Male, age 53, unknown 11.6
2007 Male, age 72, unknown 11.5
2316 Male, age 76, right hemisphere 11.4
2224 Female, age 72, unknown 11.2
2667 Female, age 75, unknown 11.1
2825 Male, age 18, unknown 10.9
2273 Male, age 74, both hemispheres 10.6
1816 Male, age 51, unknown 10.4
1817 Female, age 42, unknown 10.4
1944 Female, age 72, unknown 10.2
Red nucleus
nTPM: 11.4
2503 Female, age 72, unknown 12.1
2584 Male, age 75, left hemisphere 12.0
2588 Male, age 74, left hemisphere 12.0
1865 Male, age 51, unknown 11.9
2725 Female, age 75, unknown 11.9
1821 Female, age 72, unknown 11.6
1954 Female, age 42, unknown 11.3
2785 Male, age 18, unknown 11.2
2823 Male, age 76, right hemisphere 11.1
1904 Male, age 53, unknown 10.8
2227 Male, age 72, unknown 10.3
2769 Male, age 72, unknown 10.1
Substantia nigra
nTPM: 10.6
2665 Male, age 74, both hemispheres 11.6
1889 Female, age 72, unknown 11.3
2583 Male, age 75, right hemisphere 11.3
2590 Female, age 75, unknown 11.1
2699 Male, age 18, unknown 10.8
1916 Female, age 42, unknown 10.4
1851 Male, age 51, unknown 10.3
2241 Male, age 72, unknown 10.3
1941 Male, age 53, unknown 10.1
2409 Female, age 72, unknown 9.2
Superior colliculus
nTPM: 11.7
1913 Female, age 42, unknown 12.5
1995 Male, age 72, unknown 12.1
1796 Male, age 53, unknown 12.0
1895 Male, age 76, right hemisphere 11.9
2261 Male, age 18, unknown 11.6
1839 Male, age 51, unknown 11.5
2587 Male, age 74, left hemisphere 11.5
2087 Female, age 72, unknown 11.4
2668 Female, age 75, unknown 11.3
2664 Male, age 75, both hemispheres 11.0
Ventral tegmental area
nTPM: 10.6
2223 Female, age 72, unknown 11.6
1942 Male, age 51, unknown 10.6
2218 Male, age 76, both hemispheres 10.6
1915 Female, age 42, unknown 10.4
2410 Female, age 72, unknown 10.2
2021 Male, age 53, unknown 10.0

MIDBRAIN - GTEx RNA-seqi
Average nTPM 11.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 11.1
Samples: 139

Max nTPM: 19.2
Min nTPM: 5.2
Std nTPM: 2.9
Median nTPM: 11.1
GTEX-1HSMO-0011-R2a-SM-CL553 60-69 years, male 19.2
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 17.6
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 17.4
GTEX-1I1CD-0011-R2a-SM-CM2T3 60-69 years, female 16.7
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 15.9
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 15.8
GTEX-PWO3-0011-R2A-SM-2S1OX 60-69 years, female 15.8
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 15.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 15.6
GTEX-12WSA-0011-R2a-SM-57WDK 60-69 years, male 15.4
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 15.3
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 35.2
FF:10158-103A5 76 years, female 35.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 7.8
Pig sample Sample description nTPM
Midbrain
nTPM: 7.6
Samples: 4

Max nTPM: 8.0
Min nTPM: 7.0
Sample A Female 8.0
Sample B Female 7.0
Sample C Male 7.3
Sample D Male 7.9
Periaqueductal gray
nTPM: 6.6
Samples: 3

Max nTPM: 6.9
Min nTPM: 6.2
Sample B Female 6.2
Sample C Male 6.9
Sample D Male 6.8
Substantia nigra
nTPM: 7.5
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.5
Sample A Female 6.5
Sample B Female 7.4
Sample C Male 7.3
Sample D Male 8.7
Superior colliculi
nTPM: 7.8
Samples: 4

Max nTPM: 8.1
Min nTPM: 7.2
Sample A Female 8.1
Sample B Female 8.0
Sample C Male 7.2
Sample D Male 7.9

MIDBRAIN - Mouse RNA-seqi
Average nTPM 12.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 12.0
Samples: 4

Max nTPM: 13.8
Min nTPM: 10.5
Sample A Male 13.2
Sample B Male 10.6
Sample C Female 13.8
Sample D Female 10.5

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 7.0
356286 Antisense, RP_040617_02_D09, Mouse strain C57BL/6J (56 days, male) 8.5
71608390 Antisense, RP_050927_01_F07, Mouse strain C57BL/6J (56 days, male) 5.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.