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SLCO3A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.3 nTPM
HPA:20.3 nTPM
GTEx:23.3 nTPM
FANTOM5:37.0 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:21.9 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066327
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.3
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
1898 Male, age 80, left hemisphere 21.4
1855 Male, age 76, left hemisphere 20.8
2621 Female, age 67, right hemisphere 20.0
2148 Female, age 91, left hemisphere 18.9
1911 Female, age 85, right hemisphere 18.3
2529 Female, age 94, left hemisphere 16.1
Dentate gyrus
nTPM: 20.3
2530 Female, age 94, left hemisphere 26.8
2010 Male, age 76, both hemispheres 21.9
2531 Female, age 67, both hemispheres 19.0
1927 Female, age 91, both hemispheres 18.3
2246 Female, age 85, both hemispheres 18.1
2528 Male, age 74, both hemispheres 17.6
Entorhinal gyrus
nTPM: 18.7
2117 Female, age 91, right hemisphere 24.6
2764 Male, age 80, right hemisphere 20.1
1787 Male, age 76, left hemisphere 18.2
1938 Female, age 85, left hemisphere 17.6
2613 Female, age 94, left hemisphere 17.4
2686 Male, age 75, right hemisphere 14.2
Hippocampus, CA1
nTPM: 18.9
2749 Male, age 80, left hemisphere 24.8
1873 Female, age 85, both hemispheres 20.4
2045 Male, age 76, both hemispheres 17.2
2527 Male, age 74, both hemispheres 16.7
2082 Female, age 91, right hemisphere 15.2
Hippocampus, CA2
nTPM: 19.7
1963 Male, age 80, left hemisphere 26.3
2437 Female, age 94, left hemisphere 20.7
1892 Male, age 76, both hemispheres 19.9
2249 Male, age 74, both hemispheres 18.3
1940 Female, age 85, left hemisphere 17.1
2113 Female, age 91, right hemisphere 16.2
Hippocampus, CA3
nTPM: 18.6
1891 Female, age 85, both hemispheres 21.1
2620 Female, age 94, left hemisphere 20.0
2137 Male, age 80, left hemisphere 19.4
1867 Male, age 76, both hemispheres 18.7
2436 Male, age 74, both hemispheres 16.6
2861 Female, age 67, both hemispheres 15.8
Parahippocampal cortex
nTPM: 15.7
2532 Female, age 72, left hemisphere 18.3
1990 Female, age 91, right hemisphere 17.8
2692 Male, age 74, both hemispheres 17.0
2245 Female, age 91, both hemispheres 16.7
1933 Female, age 85, both hemispheres 16.4
2693 Female, age 94, both hemispheres 16.0
2018 Male, age 76, both hemispheres 15.8
1850 Male, age 80, both hemispheres 15.5
2250 Female, age 67, right hemisphere 12.9
2622 Female, age 67, right hemisphere 11.1
Perirhinal gyrus
nTPM: 14.2
2848 Male, age 76, right hemisphere 15.3
1847 Female, age 91, left hemisphere 15.1
1794 Male, age 80, right hemisphere 14.1
2521 Female, age 94, right hemisphere 14.1
1841 Female, age 85, right hemisphere 12.2
Subiculum
nTPM: 20.2
1901 Male, age 80, both hemispheres 25.0
2042 Male, age 76, both hemispheres 22.0
1977 Female, age 85, both hemispheres 21.4
2438 Female, age 94, left hemisphere 19.5
2619 Male, age 74, both hemispheres 16.5
2729 Female, age 91, right hemisphere 16.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.3
Samples: 197

Max nTPM: 65.3
Min nTPM: 6.5
Std nTPM: 9.1
Median nTPM: 22.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 65.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 51.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 46.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 45.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 42.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 41.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 40.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 39.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 39.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 39.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 38.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.0
FF:10153-102I9 76 years, female 54.2
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 24.3
Min nTPM: 14.0
Sample A Female 24.3
Sample B Female 19.5
Sample C Male 14.0
Sample D Male 17.6
Entorhinal cortex
nTPM: 6.8
Samples: 4

Max nTPM: 7.1
Min nTPM: 6.2
Sample A Female 7.1
Sample B Female 6.8
Sample C Male 6.2
Sample D Male 7.0
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.6
Sample A Female 12.3
Sample B Female 9.8
Sample C Male 11.6
Sample D Male 9.6
Ventral hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 21.7
Min nTPM: 10.6
Sample A Female 21.7
Sample B Female 10.6
Sample C Male 21.4
Sample D Male 16.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 20.8
Min nTPM: 13.0
Sample A Male 14.1
Sample B Male 13.0
Sample C Female 16.4
Sample D Female 20.8
Hippocampal formation
nTPM: 21.9
Samples: 4

Max nTPM: 27.8
Min nTPM: 16.2
Sample A Male 16.2
Sample B Male 21.3
Sample C Female 27.8
Sample D Female 22.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
293691 Antisense, RP_040604_02_H10, Mouse strain C57BL/6J (56 days, male) 5.0
76098411 Antisense, RP_060626_01_H12, Mouse strain C57BL/6J (56 days, male) 3.1
73834493 Antisense, RP_051212_04_A07, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.