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MAP3K19
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:1.2 nTPM
HPA:1.2 nTPM
GTEx:2.2 nTPM
FANTOM5:4.8 Scaled Tags Per Million
Pig:6.9 nTPM
Mouse:3.7 nTPM
Allen mouse:0.2 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 1.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.3
2289 Male, age 61, right hemisphere 1.3
2290 Female, age 72, unknown 0.3
1781 Male, age 74, unknown 0.2
1854 Male, age 80, left hemisphere 0.2
1857 Female, age 85, left hemisphere 0.2
2846 Female, age 79, unknown 0.2
2288 Male, age 75, left hemisphere 0.1
2481 Female, age 94, left hemisphere 0.1
Claustrum
nTPM: 0.2
2196 Female, age 79, unknown 0.4
2198 Male, age 80, both hemispheres 0.2
1956 Male, age 74, unknown 0.1
2284 Female, age 91, both hemispheres 0.1
2292 Female, age 85, both hemispheres 0.1
2392 Female, age 94, both hemispheres 0.1
2491 Male, age 75, both hemispheres 0.1
2568 Male, age 61, both hemispheres 0.1
2645 Female, age 72, unknown 0.1
Globus pallidus, externus
nTPM: 0.3
2646 Male, age 61, right hemisphere 0.4
2772 Female, age 79, unknown 0.4
1996 Male, age 80, right hemisphere 0.2
2567 Female, age 72, unknown 0.2
2395 Male, age 75, both hemispheres 0.1
Globus pallidus, internus
nTPM: 0.4
1818 Male, age 74, unknown 0.7
2483 Female, age 94, right hemisphere 0.7
2037 Male, age 80, right hemisphere 0.4
2111 Female, age 85, right hemisphere 0.2
2287 Male, age 75, right hemisphere 0.2
2566 Female, age 72, unknown 0.2
2778 Female, age 91, both hemispheres 0.2
Nucleus accumbens
nTPM: 0.7
2732 Male, age 80, right hemisphere 4.1
2698 Female, age 72, unknown 0.5
2391 Female, age 94, left hemisphere 0.4
2286 Male, age 75, left hemisphere 0.3
1806 Female, age 85, left hemisphere 0.2
1856 Female, age 91, right hemisphere 0.2
2824 Male, age 61, right hemisphere 0.2
1783 Male, age 74, unknown 0.1
Nucleus basalis of Meynert
nTPM: 0.3
2569 Male, age 61, both hemispheres 0.7
2393 Male, age 80, right hemisphere 0.2
2821 Male, age 75, both hemispheres 0.2
2484 Female, age 94, left hemisphere 0.1
Nucleus of the diagonal band
nTPM: 0.6
1979 Male, age 74, unknown 1.7
1812 Female, age 91, both hemispheres 0.4
2195 Female, age 85, both hemispheres 0.4
2775 Male, age 80, right hemisphere 0.4
2029 Male, age 61, right hemisphere 0.2
Olfactory tubercle
nTPM: 0.4
1846 Male, age 80, right hemisphere 0.5
2487 Female, age 94, left hemisphere 0.5
1998 Female, age 91, both hemispheres 0.2
2856 Male, age 75, right hemisphere 0.2
Putamen
nTPM: 0.2
1829 Male, age 74, unknown 0.2
1838 Male, age 80, right hemisphere 0.2
2466 Female, age 79, unknown 0.2
2482 Female, age 94, left hemisphere 0.2
2647 Male, age 75, left hemisphere 0.2
1937 Female, age 91, right hemisphere 0.1
2489 Female, age 72, unknown 0.1
Septal nuclei
nTPM: 1.2
2199 Male, age 80, right hemisphere 2.7
2629 Female, age 94, right hemisphere 2.3
2009 Female, age 91, both hemispheres 1.9
2394 Male, age 61, left hemisphere 0.6
1960 Male, age 74, unknown 0.5
2031 Female, age 72, unknown 0.4
2059 Female, age 85, both hemispheres 0.4

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 2.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2.2
Samples: 246

Max nTPM: 36.0
Min nTPM: 0.0
Std nTPM: 4.8
Median nTPM: 0.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 36.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 28.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 26.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 20.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 20.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 19.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 18.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 16.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 15.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 13.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 13.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1.2
Samples: 246

Max nTPM: 22.2
Min nTPM: 0.0
Std nTPM: 3.4
Median nTPM: 0.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 22.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 21.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 20.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 18.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 17.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 16.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 15.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 15.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 12.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 9.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 8.3
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Brain - Putamen (basal ganglia)
Average nTPM: 0.0
Samples: 205

Max nTPM: 3.2
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 3.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 0.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 0.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 0.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 0.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 0.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 0.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 0.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 0.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 0.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 0.2
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 4.8
FF:10164-103B2 76 years, female 4.8
Globus pallidus
Scaled Tags Per Million: 0.0
FF:10175-103C4 60 years, female 0.0
FF:10161-103A8 76 years, female 0.0
Nucleus accumbens
Scaled Tags Per Million: 1.9
FF:10037-101F1 23-56 years, mixed 1.9
Putamen
Scaled Tags Per Million: 0.2
FF:10176-103C5 60 years, female 0.2

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 6.9
Pig sample Sample description nTPM
Caudate
nTPM: 6.9
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.1
Sample A Female 8.4
Sample B Female 6.7
Sample C Male 6.3
Sample D Male 6.1
Putamen
nTPM: 2.1
Samples: 4

Max nTPM: 2.7
Min nTPM: 1.4
Sample A Female 2.1
Sample B Female 2.7
Sample C Male 1.4
Sample D Male 2.3
Septum
nTPM: 5.8
Samples: 4

Max nTPM: 12.3
Min nTPM: 2.5
Sample A Female 2.5
Sample B Female 4.2
Sample C Male 4.1
Sample D Male 12.3
Ventral pallidum
nTPM: 2.8
Samples: 4

Max nTPM: 4.5
Min nTPM: 1.7
Sample A Female 2.6
Sample B Female 2.3
Sample C Male 1.7
Sample D Male 4.5

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 3.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2.7
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.3
Sample A Male 2.3
Sample B Male 2.8
Sample C Female 3.0
Sample D Female 2.8
Septum
nTPM: 3.7
Samples: 4

Max nTPM: 4.5
Min nTPM: 2.8
Sample A Male 2.8
Sample B Male 4.0
Sample C Female 3.4
Sample D Female 4.5
Ventral forebrain
nTPM: 1.7
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.4
Sample A Male 1.6
Sample B Male 1.4
Sample C Female 1.4
Sample D Female 2.2

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
75988578 Antisense, RP_060620_02_D09, Mouse strain C57BL/6J (56 days, male) 0.3
71393310 Antisense, RP_050609_01_D09, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.1
75988578 Antisense, RP_060620_02_D09, Mouse strain C57BL/6J (56 days, male) 0.2
71393310 Antisense, RP_050609_01_D09, Mouse strain C57BL/6J (56 days, male) 0.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.