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FAM89B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:60.7 nTPM
HPA:60.7 nTPM
GTEx:61.5 nTPM
FANTOM5:20.7 Scaled Tags Per Million
Pig:42.1 nTPM
Mouse:19.7 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046895
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.7
Sample id Sample description nTPM
Hippocampus
nTPM: 60.7
2621 Female, age 67, right hemisphere 65.2
2529 Female, age 94, left hemisphere 61.3
2148 Female, age 91, left hemisphere 60.8
1911 Female, age 85, right hemisphere 60.3
1898 Male, age 80, left hemisphere 60.1
1855 Male, age 76, left hemisphere 56.6
Dentate gyrus
nTPM: 56.5
2531 Female, age 67, both hemispheres 62.6
1927 Female, age 91, both hemispheres 61.0
2530 Female, age 94, left hemisphere 58.8
2010 Male, age 76, both hemispheres 52.9
2528 Male, age 74, both hemispheres 52.4
2246 Female, age 85, both hemispheres 51.5
Entorhinal gyrus
nTPM: 59.3
2613 Female, age 94, left hemisphere 67.7
2764 Male, age 80, right hemisphere 62.8
2686 Male, age 75, right hemisphere 58.3
1787 Male, age 76, left hemisphere 56.5
1938 Female, age 85, left hemisphere 55.3
2117 Female, age 91, right hemisphere 54.9
Hippocampus, CA1
nTPM: 54.8
2749 Male, age 80, left hemisphere 63.5
2527 Male, age 74, both hemispheres 57.4
1873 Female, age 85, both hemispheres 54.8
2082 Female, age 91, right hemisphere 49.5
2045 Male, age 76, both hemispheres 48.6
Hippocampus, CA2
nTPM: 56.7
1963 Male, age 80, left hemisphere 65.5
1892 Male, age 76, both hemispheres 57.0
2437 Female, age 94, left hemisphere 56.8
1940 Female, age 85, left hemisphere 54.5
2249 Male, age 74, both hemispheres 54.3
2113 Female, age 91, right hemisphere 52.3
Hippocampus, CA3
nTPM: 59.5
2861 Female, age 67, both hemispheres 72.2
2620 Female, age 94, left hemisphere 63.3
2137 Male, age 80, left hemisphere 60.7
1867 Male, age 76, both hemispheres 57.3
1891 Female, age 85, both hemispheres 53.5
2436 Male, age 74, both hemispheres 49.8
Parahippocampal cortex
nTPM: 56.5
2622 Female, age 67, right hemisphere 65.0
2245 Female, age 91, both hemispheres 59.0
1990 Female, age 91, right hemisphere 57.6
1933 Female, age 85, both hemispheres 57.0
2532 Female, age 72, left hemisphere 56.9
2250 Female, age 67, right hemisphere 55.6
2692 Male, age 74, both hemispheres 55.4
1850 Male, age 80, both hemispheres 53.5
2018 Male, age 76, both hemispheres 52.9
2693 Female, age 94, both hemispheres 52.5
Perirhinal gyrus
nTPM: 57.1
1847 Female, age 91, left hemisphere 59.8
1794 Male, age 80, right hemisphere 57.6
1841 Female, age 85, right hemisphere 57.4
2521 Female, age 94, right hemisphere 57.3
2848 Male, age 76, right hemisphere 53.4
Subiculum
nTPM: 55.0
1901 Male, age 80, both hemispheres 58.8
2619 Male, age 74, both hemispheres 58.2
1977 Female, age 85, both hemispheres 55.8
2729 Female, age 91, right hemisphere 55.3
2042 Male, age 76, both hemispheres 54.0
2438 Female, age 94, left hemisphere 48.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.5
Samples: 197

Max nTPM: 192.4
Min nTPM: 19.0
Std nTPM: 25.1
Median nTPM: 58.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 192.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 161.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 131.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 124.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 124.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 123.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 120.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 116.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 109.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 106.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 104.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.7
FF:10169-103B7 60 years, female 20.9
FF:10153-102I9 76 years, female 20.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.3
Samples: 4

Max nTPM: 53.6
Min nTPM: 33.9
Sample A Female 53.6
Sample B Female 43.4
Sample C Male 33.9
Sample D Male 34.1
Entorhinal cortex
nTPM: 42.1
Samples: 4

Max nTPM: 46.6
Min nTPM: 35.5
Sample A Female 46.0
Sample B Female 40.4
Sample C Male 46.6
Sample D Male 35.5
Subiculum
nTPM: 38.9
Samples: 4

Max nTPM: 49.2
Min nTPM: 34.1
Sample A Female 49.2
Sample B Female 37.1
Sample C Male 34.1
Sample D Male 35.1
Ventral hippocampus
nTPM: 39.9
Samples: 4

Max nTPM: 46.6
Min nTPM: 29.2
Sample A Female 38.1
Sample B Female 29.2
Sample C Male 45.8
Sample D Male 46.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 22.0
Min nTPM: 16.7
Sample A Male 16.7
Sample B Male 21.2
Sample C Female 22.0
Sample D Female 18.7
Hippocampal formation
nTPM: 19.7
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.9
Sample A Male 20.8
Sample B Male 16.9
Sample C Female 21.1
Sample D Female 20.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
1898 Antisense, RP_040507_02_E09, Mouse strain C57BL/6J (56 days, male) 1.6
1899 Antisense, RP_040507_02_E09, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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