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RPS6KA3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.0 nTPM
HPA:10.0 nTPM
GTEx:5.7 nTPM
FANTOM5:34.4 Scaled Tags Per Million
Pig:12.7 nTPM
Mouse:12.1 nTPM
Allen mouse:0.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 10.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 5.8
2666 Male, age 74, left hemisphere 7.3
1827 Male, age 72, unknown 6.9
2219 Male, age 76, both hemispheres 6.9
2019 Male, age 18, unknown 6.1
2828 Female, age 72, unknown 6.1
1833 Male, age 53, unknown 5.7
1870 Female, age 42, unknown 5.1
2411 Female, age 72, unknown 5.1
1830 Male, age 51, unknown 4.8
2586 Male, age 75, left hemisphere 3.7
Dorsal raphe nucleus
nTPM: 8.8
2298 Female, age 72, unknown 11.7
2047 Male, age 72, unknown 10.6
2750 Male, age 76, both hemispheres 8.5
1828 Male, age 53, unknown 7.1
2016 Female, age 72, unknown 6.1
Inferior colliculus
nTPM: 7.0
2097 Female, age 72, unknown 8.7
1890 Male, age 53, unknown 8.5
1848 Female, age 42, unknown 5.9
2849 Male, age 72, unknown 4.9
Median raphe nucleus
nTPM: 10.0
2220 Male, age 76, midline 10.0
Pedunculopontine tegmental nucleus
nTPM: 6.4
2334 Male, age 80, both hemispheres 6.8
2338 Male, age 61, both hemispheres 6.3
1921 Female, age 85, both hemispheres 6.2
Periaquaductal grey, anterior
nTPM: 5.9
2502 Female, age 75, unknown 6.7
1795 Male, age 51, unknown 5.5
1947 Male, age 18, unknown 5.4
Periaquaductal grey, dorsal
nTPM: 6.6
2850 Male, age 76, both hemispheres 8.7
1831 Male, age 72, unknown 6.4
1840 Male, age 53, unknown 5.6
2464 Female, age 72, unknown 5.6
Periaquaductal grey, lateral
nTPM: 6.1
2140 Male, age 76, both hemispheres 6.9
2053 Male, age 18, unknown 6.3
2272 Male, age 74, both hemispheres 5.0
Pretectal area
nTPM: 6.3
1944 Female, age 72, unknown 7.6
1816 Male, age 51, unknown 7.2
2224 Female, age 72, unknown 6.7
1817 Female, age 42, unknown 6.6
2007 Male, age 72, unknown 6.3
2316 Male, age 76, right hemisphere 5.9
2407 Male, age 75, both hemispheres 5.9
2667 Female, age 75, unknown 5.9
1815 Male, age 53, unknown 5.8
2825 Male, age 18, unknown 5.8
2273 Male, age 74, both hemispheres 5.3
Red nucleus
nTPM: 6.2
1821 Female, age 72, unknown 8.3
1904 Male, age 53, unknown 7.5
1954 Female, age 42, unknown 7.3
1865 Male, age 51, unknown 6.6
2227 Male, age 72, unknown 6.2
2725 Female, age 75, unknown 6.2
2584 Male, age 75, left hemisphere 5.9
2785 Male, age 18, unknown 5.8
2769 Male, age 72, unknown 5.7
2503 Female, age 72, unknown 5.4
2823 Male, age 76, right hemisphere 5.1
2588 Male, age 74, left hemisphere 4.5
Substantia nigra
nTPM: 8.3
1916 Female, age 42, unknown 11.8
1851 Male, age 51, unknown 9.6
2665 Male, age 74, both hemispheres 9.3
2241 Male, age 72, unknown 9.2
2699 Male, age 18, unknown 8.7
1941 Male, age 53, unknown 7.5
2409 Female, age 72, unknown 7.5
1889 Female, age 72, unknown 6.9
2583 Male, age 75, right hemisphere 6.5
2590 Female, age 75, unknown 6.0
Superior colliculus
nTPM: 5.7
2087 Female, age 72, unknown 7.1
2668 Female, age 75, unknown 7.1
2587 Male, age 74, left hemisphere 6.8
1796 Male, age 53, unknown 6.6
2261 Male, age 18, unknown 6.0
1895 Male, age 76, right hemisphere 5.2
1913 Female, age 42, unknown 5.0
1839 Male, age 51, unknown 4.8
1995 Male, age 72, unknown 4.6
2664 Male, age 75, both hemispheres 3.8
Ventral tegmental area
nTPM: 8.2
2218 Male, age 76, both hemispheres 9.2
1915 Female, age 42, unknown 8.9
2223 Female, age 72, unknown 8.5
1942 Male, age 51, unknown 7.9
2021 Male, age 53, unknown 7.6
2410 Female, age 72, unknown 6.8

MIDBRAIN - GTEx RNA-seqi
Average nTPM 5.7
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 5.7
Samples: 139

Max nTPM: 22.1
Min nTPM: 2.0
Std nTPM: 2.3
Median nTPM: 5.4
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 22.1
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 16.8
GTEX-1J1OQ-0011-R2b-SM-ARU88 40-49 years, female 11.4
GTEX-1H23P-0011-R2a-SM-CKZP3 60-69 years, male 10.8
GTEX-NPJ8-0011-R2a-SM-2TC6M 40-49 years, male 10.1
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 9.7
GTEX-1GN73-0011-R2a-SM-CJI2V 60-69 years, male 8.9
GTEX-T5JC-0011-R2A-SM-32PLZ 20-29 years, male 8.7
GTEX-13X6I-0011-R2b-SM-5PNWQ 60-69 years, male 8.4
GTEX-XMD1-0011-R2B-SM-4AT5N 60-69 years, male 8.4
GTEX-15CHQ-0011-R2b-SM-6AJAD 60-69 years, male 8.2
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 34.4
FF:10158-103A5 76 years, female 34.4

MIDBRAIN - Pig RNA-seqi
Average nTPM 12.7
Pig sample Sample description nTPM
Midbrain
nTPM: 11.6
Samples: 4

Max nTPM: 13.3
Min nTPM: 9.1
Sample A Female 9.1
Sample B Female 11.7
Sample C Male 12.3
Sample D Male 13.3
Periaqueductal gray
nTPM: 10.4
Samples: 3

Max nTPM: 11.9
Min nTPM: 8.8
Sample B Female 10.6
Sample C Male 11.9
Sample D Male 8.8
Substantia nigra
nTPM: 12.8
Samples: 4

Max nTPM: 15.2
Min nTPM: 9.4
Sample A Female 15.2
Sample B Female 13.3
Sample C Male 13.1
Sample D Male 9.4
Superior colliculi
nTPM: 12.7
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.3
Sample A Female 15.3
Sample B Female 11.3
Sample C Male 12.0
Sample D Male 12.0

MIDBRAIN - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Midbrain
nTPM: 12.1
Samples: 4

Max nTPM: 12.8
Min nTPM: 11.3
Sample A Male 11.3
Sample B Male 12.8
Sample C Female 12.3
Sample D Female 11.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.2
70301931 Antisense, RP_050607_03_B08, Mouse strain C57BL/6J (56 days, male) 0.5
71670727 Antisense, RP_050607_03_B08, Mouse strain C57BL/6J (56 days, male) 0.2
70793977 Antisense, RP_050712_01_B04, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.