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ZBTB38
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.4 nTPM
HPA:14.4 nTPM
GTEx:10.5 nTPM
FANTOM5:119.8 Scaled Tags Per Million
Pig:31.6 nTPM
Mouse:15.0 nTPM
Allen mouse:7.3 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 14.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 11.5
2288 Male, age 75, left hemisphere 17.0
2481 Female, age 94, left hemisphere 16.3
1781 Male, age 74, unknown 12.8
2846 Female, age 79, unknown 12.4
2290 Female, age 72, unknown 9.5
1854 Male, age 80, left hemisphere 8.9
1857 Female, age 85, left hemisphere 8.5
2289 Male, age 61, right hemisphere 6.4
Claustrum
nTPM: 11.3
1956 Male, age 74, unknown 13.9
2568 Male, age 61, both hemispheres 13.5
2392 Female, age 94, both hemispheres 13.2
2196 Female, age 79, unknown 13.0
2292 Female, age 85, both hemispheres 12.7
2198 Male, age 80, both hemispheres 11.7
2645 Female, age 72, unknown 8.9
2491 Male, age 75, both hemispheres 8.4
2284 Female, age 91, both hemispheres 7.0
Globus pallidus, externus
nTPM: 9.9
1996 Male, age 80, right hemisphere 12.0
2395 Male, age 75, both hemispheres 12.0
2772 Female, age 79, unknown 11.4
2567 Female, age 72, unknown 8.6
2646 Male, age 61, right hemisphere 5.7
Globus pallidus, internus
nTPM: 14.4
2287 Male, age 75, right hemisphere 20.7
2778 Female, age 91, both hemispheres 19.2
2111 Female, age 85, right hemisphere 17.2
1818 Male, age 74, unknown 15.2
2483 Female, age 94, right hemisphere 9.8
2566 Female, age 72, unknown 9.8
2037 Male, age 80, right hemisphere 8.5
Nucleus accumbens
nTPM: 10.4
2391 Female, age 94, left hemisphere 16.3
2286 Male, age 75, left hemisphere 13.4
2698 Female, age 72, unknown 12.1
1783 Male, age 74, unknown 9.9
1856 Female, age 91, right hemisphere 9.8
1806 Female, age 85, left hemisphere 8.5
2824 Male, age 61, right hemisphere 8.3
2732 Male, age 80, right hemisphere 4.7
Nucleus basalis of Meynert
nTPM: 9.1
2821 Male, age 75, both hemispheres 12.3
2484 Female, age 94, left hemisphere 11.4
2393 Male, age 80, right hemisphere 8.2
2569 Male, age 61, both hemispheres 4.4
Nucleus of the diagonal band
nTPM: 8.5
2029 Male, age 61, right hemisphere 10.2
2195 Female, age 85, both hemispheres 9.1
1979 Male, age 74, unknown 8.6
1812 Female, age 91, both hemispheres 7.8
2775 Male, age 80, right hemisphere 6.8
Olfactory tubercle
nTPM: 7.7
2856 Male, age 75, right hemisphere 10.3
1846 Male, age 80, right hemisphere 8.1
2487 Female, age 94, left hemisphere 6.3
1998 Female, age 91, both hemispheres 6.2
Putamen
nTPM: 10.9
2482 Female, age 94, left hemisphere 16.4
1829 Male, age 74, unknown 12.3
1838 Male, age 80, right hemisphere 10.5
2647 Male, age 75, left hemisphere 9.9
2489 Female, age 72, unknown 9.5
2466 Female, age 79, unknown 9.4
1937 Female, age 91, right hemisphere 8.4
Septal nuclei
nTPM: 6.1
2629 Female, age 94, right hemisphere 9.9
2031 Female, age 72, unknown 9.4
2009 Female, age 91, both hemispheres 5.6
2394 Male, age 61, left hemisphere 5.1
1960 Male, age 74, unknown 5.0
2199 Male, age 80, right hemisphere 4.2
2059 Female, age 85, both hemispheres 3.6

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 10.5
Samples: 246

Max nTPM: 18.2
Min nTPM: 4.4
Std nTPM: 2.4
Median nTPM: 10.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 18.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 18.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 17.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 17.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 17.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 17.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 16.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 16.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 15.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 14.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 9.5
Samples: 246

Max nTPM: 21.5
Min nTPM: 4.4
Std nTPM: 2.4
Median nTPM: 9.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 21.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 18.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 16.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 16.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 15.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 15.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 14.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 14.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 14.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 14.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 14.1
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Brain - Putamen (basal ganglia)
Average nTPM: 10.1
Samples: 205

Max nTPM: 19.6
Min nTPM: 4.5
Std nTPM: 2.5
Median nTPM: 10.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 19.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 17.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 16.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 16.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 15.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 15.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 15.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 15.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 15.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 14.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14.9
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 104.4
FF:10164-103B2 76 years, female 104.4
Globus pallidus
Scaled Tags Per Million: 92.0
FF:10175-103C4 60 years, female 110.5
FF:10161-103A8 76 years, female 73.5
Nucleus accumbens
Scaled Tags Per Million: 90.4
FF:10037-101F1 23-56 years, mixed 90.4
Putamen
Scaled Tags Per Million: 119.8
FF:10176-103C5 60 years, female 119.8

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 31.6
Pig sample Sample description nTPM
Caudate
nTPM: 25.5
Samples: 4

Max nTPM: 27.0
Min nTPM: 24.1
Sample A Female 24.1
Sample B Female 24.6
Sample C Male 27.0
Sample D Male 26.1
Putamen
nTPM: 31.6
Samples: 4

Max nTPM: 35.9
Min nTPM: 27.0
Sample A Female 32.7
Sample B Female 27.0
Sample C Male 35.9
Sample D Male 30.7
Septum
nTPM: 27.6
Samples: 4

Max nTPM: 29.2
Min nTPM: 26.2
Sample A Female 28.1
Sample B Female 26.2
Sample C Male 29.2
Sample D Male 27.0
Ventral pallidum
nTPM: 29.2
Samples: 4

Max nTPM: 31.8
Min nTPM: 26.5
Sample A Female 27.8
Sample B Female 26.5
Sample C Male 31.8
Sample D Male 30.8

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 15.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 15.0
Samples: 4

Max nTPM: 15.5
Min nTPM: 14.7
Sample A Male 15.5
Sample B Male 14.7
Sample C Female 14.7
Sample D Female 15.1
Septum
nTPM: 12.5
Samples: 4

Max nTPM: 13.7
Min nTPM: 11.6
Sample A Male 12.5
Sample B Male 12.0
Sample C Female 11.6
Sample D Female 13.7
Ventral forebrain
nTPM: 14.4
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.6
Sample A Male 14.8
Sample B Male 14.7
Sample C Female 12.6
Sample D Female 15.4

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.3
70228627 Antisense, RP_050524_04_B01, Mouse strain C57BL/6J (56 days, male) 7.3
Pallidum
Expression energy: 6.4
70228627 Antisense, RP_050524_04_B01, Mouse strain C57BL/6J (56 days, male) 6.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.