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MAGEF1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:29.1 nTPM
HPA:29.1 nTPM
GTEx:33.9 nTPM
FANTOM5:49.4 Scaled Tags Per Million
Pig:22.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046899
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.1
Sample id Sample description nTPM
Hippocampus
nTPM: 26.5
1898 Male, age 80, left hemisphere 28.1
2529 Female, age 94, left hemisphere 27.5
1855 Male, age 76, left hemisphere 26.5
2621 Female, age 67, right hemisphere 26.5
2148 Female, age 91, left hemisphere 25.5
1911 Female, age 85, right hemisphere 25.0
Dentate gyrus
nTPM: 25.6
1927 Female, age 91, both hemispheres 26.8
2246 Female, age 85, both hemispheres 26.1
2530 Female, age 94, left hemisphere 25.6
2010 Male, age 76, both hemispheres 25.5
2528 Male, age 74, both hemispheres 25.2
2531 Female, age 67, both hemispheres 24.2
Entorhinal gyrus
nTPM: 26.8
1938 Female, age 85, left hemisphere 29.6
2764 Male, age 80, right hemisphere 28.3
2117 Female, age 91, right hemisphere 26.6
1787 Male, age 76, left hemisphere 26.4
2613 Female, age 94, left hemisphere 25.6
2686 Male, age 75, right hemisphere 24.1
Hippocampus, CA1
nTPM: 26.9
2749 Male, age 80, left hemisphere 28.5
2527 Male, age 74, both hemispheres 28.4
1873 Female, age 85, both hemispheres 27.6
2045 Male, age 76, both hemispheres 25.3
2082 Female, age 91, right hemisphere 25.0
Hippocampus, CA2
nTPM: 26.4
2249 Male, age 74, both hemispheres 29.0
1892 Male, age 76, both hemispheres 26.9
1940 Female, age 85, left hemisphere 26.2
1963 Male, age 80, left hemisphere 25.9
2113 Female, age 91, right hemisphere 25.6
2437 Female, age 94, left hemisphere 24.9
Hippocampus, CA3
nTPM: 25.9
2436 Male, age 74, both hemispheres 27.8
2137 Male, age 80, left hemisphere 26.8
2620 Female, age 94, left hemisphere 26.4
1891 Female, age 85, both hemispheres 25.3
1867 Male, age 76, both hemispheres 25.2
2861 Female, age 67, both hemispheres 24.2
Parahippocampal cortex
nTPM: 26.8
2250 Female, age 67, right hemisphere 28.9
2245 Female, age 91, both hemispheres 28.6
1933 Female, age 85, both hemispheres 28.0
1850 Male, age 80, both hemispheres 27.9
1990 Female, age 91, right hemisphere 27.7
2532 Female, age 72, left hemisphere 27.3
2693 Female, age 94, both hemispheres 25.7
2622 Female, age 67, right hemisphere 24.5
2692 Male, age 74, both hemispheres 24.5
2018 Male, age 76, both hemispheres 24.4
Perirhinal gyrus
nTPM: 29.1
1847 Female, age 91, left hemisphere 31.0
1841 Female, age 85, right hemisphere 30.0
1794 Male, age 80, right hemisphere 29.4
2848 Male, age 76, right hemisphere 27.7
2521 Female, age 94, right hemisphere 27.5
Subiculum
nTPM: 25.2
1977 Female, age 85, both hemispheres 27.6
2438 Female, age 94, left hemisphere 25.8
2619 Male, age 74, both hemispheres 25.5
1901 Male, age 80, both hemispheres 25.3
2042 Male, age 76, both hemispheres 23.7
2729 Female, age 91, right hemisphere 23.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.9
Samples: 197

Max nTPM: 59.2
Min nTPM: 16.2
Std nTPM: 8.4
Median nTPM: 33.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 59.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 54.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 52.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 51.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 51.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 50.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 49.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 48.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 48.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 48.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 48.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.4
FF:10153-102I9 76 years, female 59.1
FF:10169-103B7 60 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 26.4
Min nTPM: 17.7
Sample A Female 26.4
Sample B Female 23.4
Sample C Male 19.9
Sample D Male 17.7
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 21.0
Min nTPM: 18.2
Sample A Female 21.0
Sample B Female 19.8
Sample C Male 18.8
Sample D Male 18.2
Subiculum
nTPM: 19.1
Samples: 4

Max nTPM: 23.6
Min nTPM: 16.5
Sample A Female 23.6
Sample B Female 17.4
Sample C Male 19.0
Sample D Male 16.5
Ventral hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 28.7
Min nTPM: 15.0
Sample A Female 20.3
Sample B Female 15.0
Sample C Male 24.3
Sample D Male 28.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.