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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:37.1 nTPM
HPA:37.1 nTPM
GTEx:33.9 nTPM
FANTOM5:23.6 Scaled Tags Per Million
Mouse:25.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008507
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.1
Sample id Sample description nTPM
Hippocampus
nTPM: 36.0
1898 Male, age 80, left hemisphere 38.2
2621 Female, age 67, right hemisphere 36.4
1855 Male, age 76, left hemisphere 35.8
2529 Female, age 94, left hemisphere 35.6
1911 Female, age 85, right hemisphere 35.0
2148 Female, age 91, left hemisphere 34.8
Dentate gyrus
nTPM: 35.8
2530 Female, age 94, left hemisphere 36.6
2010 Male, age 76, both hemispheres 36.3
1927 Female, age 91, both hemispheres 35.5
2531 Female, age 67, both hemispheres 35.5
2528 Male, age 74, both hemispheres 35.4
2246 Female, age 85, both hemispheres 35.3
Entorhinal gyrus
nTPM: 36.1
2613 Female, age 94, left hemisphere 37.5
1938 Female, age 85, left hemisphere 36.2
1787 Male, age 76, left hemisphere 36.1
2117 Female, age 91, right hemisphere 36.0
2764 Male, age 80, right hemisphere 35.8
2686 Male, age 75, right hemisphere 35.0
Hippocampus, CA1
nTPM: 36.1
2749 Male, age 80, left hemisphere 37.8
2527 Male, age 74, both hemispheres 36.8
1873 Female, age 85, both hemispheres 36.2
2082 Female, age 91, right hemisphere 35.5
2045 Male, age 76, both hemispheres 34.4
Hippocampus, CA2
nTPM: 36.2
1892 Male, age 76, both hemispheres 37.3
1963 Male, age 80, left hemisphere 36.5
2249 Male, age 74, both hemispheres 36.2
1940 Female, age 85, left hemisphere 35.8
2113 Female, age 91, right hemisphere 35.8
2437 Female, age 94, left hemisphere 35.7
Hippocampus, CA3
nTPM: 36.0
1891 Female, age 85, both hemispheres 36.9
2137 Male, age 80, left hemisphere 36.7
1867 Male, age 76, both hemispheres 36.2
2436 Male, age 74, both hemispheres 35.9
2620 Female, age 94, left hemisphere 35.8
2861 Female, age 67, both hemispheres 34.4
Parahippocampal cortex
nTPM: 36.2
1850 Male, age 80, both hemispheres 37.7
2018 Male, age 76, both hemispheres 36.9
2245 Female, age 91, both hemispheres 36.4
2693 Female, age 94, both hemispheres 36.4
2250 Female, age 67, right hemisphere 36.0
1990 Female, age 91, right hemisphere 35.9
1933 Female, age 85, both hemispheres 35.8
2532 Female, age 72, left hemisphere 35.6
2622 Female, age 67, right hemisphere 35.4
2692 Male, age 74, both hemispheres 35.4
Perirhinal gyrus
nTPM: 37.1
1847 Female, age 91, left hemisphere 38.0
2521 Female, age 94, right hemisphere 37.3
1794 Male, age 80, right hemisphere 37.2
1841 Female, age 85, right hemisphere 37.1
2848 Male, age 76, right hemisphere 35.8
Subiculum
nTPM: 36.1
2619 Male, age 74, both hemispheres 37.3
2438 Female, age 94, left hemisphere 36.8
1901 Male, age 80, both hemispheres 36.7
1977 Female, age 85, both hemispheres 35.9
2042 Male, age 76, both hemispheres 35.7
2729 Female, age 91, right hemisphere 34.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.9
Samples: 197

Max nTPM: 82.1
Min nTPM: 18.7
Std nTPM: 8.9
Median nTPM: 32.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 82.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 68.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 64.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 59.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 55.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 53.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 53.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 52.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 52.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 52.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.6
FF:10153-102I9 76 years, female 26.3
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 26.1
Min nTPM: 24.0
Sample A Male 24.5
Sample B Male 24.0
Sample C Female 25.8
Sample D Female 26.1
Hippocampal formation
nTPM: 23.5
Samples: 4

Max nTPM: 28.3
Min nTPM: 21.2
Sample A Male 28.3
Sample B Male 22.9
Sample C Female 21.7
Sample D Female 21.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
632512 Antisense, RP_040907_01_G01, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.