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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:45.4 nTPM
HPA:45.4 nTPM
GTEx:33.2 nTPM
FANTOM5:38.1 Scaled Tags Per Million
Pig:9.7 nTPM
Mouse:14.0 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041491Antibody CAB046012
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.4
Sample id Sample description nTPM
Hippocampus
nTPM: 43.5
2621 Female, age 67, right hemisphere 45.3
1898 Male, age 80, left hemisphere 45.2
2148 Female, age 91, left hemisphere 44.2
1855 Male, age 76, left hemisphere 43.8
2529 Female, age 94, left hemisphere 42.7
1911 Female, age 85, right hemisphere 39.8
Dentate gyrus
nTPM: 43.7
2010 Male, age 76, both hemispheres 45.6
1927 Female, age 91, both hemispheres 45.2
2528 Male, age 74, both hemispheres 43.7
2530 Female, age 94, left hemisphere 43.3
2531 Female, age 67, both hemispheres 42.2
2246 Female, age 85, both hemispheres 42.0
Entorhinal gyrus
nTPM: 45.0
1787 Male, age 76, left hemisphere 47.8
2764 Male, age 80, right hemisphere 46.9
2613 Female, age 94, left hemisphere 45.1
1938 Female, age 85, left hemisphere 44.3
2686 Male, age 75, right hemisphere 43.4
2117 Female, age 91, right hemisphere 42.4
Hippocampus, CA1
nTPM: 45.4
2749 Male, age 80, left hemisphere 49.4
2045 Male, age 76, both hemispheres 47.5
2527 Male, age 74, both hemispheres 43.7
1873 Female, age 85, both hemispheres 43.3
2082 Female, age 91, right hemisphere 42.9
Hippocampus, CA2
nTPM: 44.0
1892 Male, age 76, both hemispheres 47.8
1963 Male, age 80, left hemisphere 47.1
2249 Male, age 74, both hemispheres 44.1
2113 Female, age 91, right hemisphere 42.3
2437 Female, age 94, left hemisphere 41.8
1940 Female, age 85, left hemisphere 41.0
Hippocampus, CA3
nTPM: 45.0
1867 Male, age 76, both hemispheres 47.9
2137 Male, age 80, left hemisphere 46.1
2861 Female, age 67, both hemispheres 45.9
2436 Male, age 74, both hemispheres 44.7
2620 Female, age 94, left hemisphere 44.4
1891 Female, age 85, both hemispheres 41.1
Parahippocampal cortex
nTPM: 43.1
1933 Female, age 85, both hemispheres 45.1
1850 Male, age 80, both hemispheres 44.8
1990 Female, age 91, right hemisphere 44.8
2245 Female, age 91, both hemispheres 44.3
2532 Female, age 72, left hemisphere 43.2
2250 Female, age 67, right hemisphere 43.1
2622 Female, age 67, right hemisphere 42.6
2018 Male, age 76, both hemispheres 41.3
2692 Male, age 74, both hemispheres 41.2
2693 Female, age 94, both hemispheres 40.5
Perirhinal gyrus
nTPM: 44.8
1847 Female, age 91, left hemisphere 47.8
1794 Male, age 80, right hemisphere 45.1
1841 Female, age 85, right hemisphere 44.5
2848 Male, age 76, right hemisphere 44.1
2521 Female, age 94, right hemisphere 42.5
Subiculum
nTPM: 42.4
1977 Female, age 85, both hemispheres 43.7
2438 Female, age 94, left hemisphere 43.0
1901 Male, age 80, both hemispheres 42.7
2042 Male, age 76, both hemispheres 41.9
2619 Male, age 74, both hemispheres 41.7
2729 Female, age 91, right hemisphere 41.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.2
Samples: 197

Max nTPM: 68.1
Min nTPM: 20.5
Std nTPM: 6.1
Median nTPM: 32.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 68.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 48.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 47.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 47.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 47.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 46.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 43.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 42.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 42.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 42.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.1
FF:10169-103B7 60 years, female 46.0
FF:10153-102I9 76 years, female 30.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 13.1
Min nTPM: 7.3
Sample A Female 13.1
Sample B Female 9.6
Sample C Male 8.9
Sample D Male 7.3
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 10.1
Min nTPM: 6.4
Sample A Female 8.9
Sample B Female 8.1
Sample C Male 10.1
Sample D Male 6.4
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 12.3
Min nTPM: 7.0
Sample A Female 12.3
Sample B Female 8.2
Sample C Male 8.6
Sample D Male 7.0
Ventral hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.0
Sample A Female 8.5
Sample B Female 7.0
Sample C Male 10.7
Sample D Male 8.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.2
Sample A Male 14.3
Sample B Male 15.3
Sample C Female 15.1
Sample D Female 11.2
Hippocampal formation
nTPM: 13.8
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.0
Sample A Male 11.0
Sample B Male 12.7
Sample C Female 15.3
Sample D Female 16.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
69080052 Antisense, RP_050324_01_G03, Mouse strain C57BL/6J (56 days, male) 14.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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