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DMAP1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.2 nTPM
HPA:31.2 nTPM
GTEx:29.4 nTPM
FANTOM5:16.9 Scaled Tags Per Million
Pig:14.1 nTPM
Mouse:20.2 nTPM
Allen mouse:7.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 31.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 30.5
2586 Male, age 75, left hemisphere 32.6
1827 Male, age 72, unknown 31.9
2019 Male, age 18, unknown 31.3
2666 Male, age 74, left hemisphere 31.1
2411 Female, age 72, unknown 30.3
1870 Female, age 42, unknown 30.1
2828 Female, age 72, unknown 30.1
1833 Male, age 53, unknown 29.4
2219 Male, age 76, both hemispheres 29.2
1830 Male, age 51, unknown 28.8
Dorsal raphe nucleus
nTPM: 29.5
2298 Female, age 72, unknown 30.5
1828 Male, age 53, unknown 30.2
2750 Male, age 76, both hemispheres 29.5
2016 Female, age 72, unknown 29.3
2047 Male, age 72, unknown 28.1
Inferior colliculus
nTPM: 29.7
2097 Female, age 72, unknown 30.2
1890 Male, age 53, unknown 29.9
1848 Female, age 42, unknown 29.7
2849 Male, age 72, unknown 29.1
Median raphe nucleus
nTPM: 28.4
2220 Male, age 76, midline 28.4
Pedunculopontine tegmental nucleus
nTPM: 29.2
1921 Female, age 85, both hemispheres 30.4
2334 Male, age 80, both hemispheres 29.2
2338 Male, age 61, both hemispheres 27.9
Periaquaductal grey, anterior
nTPM: 31.2
1947 Male, age 18, unknown 32.1
1795 Male, age 51, unknown 30.8
2502 Female, age 75, unknown 30.7
Periaquaductal grey, dorsal
nTPM: 28.3
1831 Male, age 72, unknown 28.7
1840 Male, age 53, unknown 28.7
2850 Male, age 76, both hemispheres 27.9
2464 Female, age 72, unknown 27.8
Periaquaductal grey, lateral
nTPM: 30.0
2272 Male, age 74, both hemispheres 31.6
2053 Male, age 18, unknown 29.4
2140 Male, age 76, both hemispheres 29.1
Pretectal area
nTPM: 31.0
1944 Female, age 72, unknown 33.3
1816 Male, age 51, unknown 32.7
2007 Male, age 72, unknown 32.3
2273 Male, age 74, both hemispheres 32.1
1817 Female, age 42, unknown 32.0
2667 Female, age 75, unknown 31.7
2224 Female, age 72, unknown 30.5
1815 Male, age 53, unknown 30.3
2407 Male, age 75, both hemispheres 29.4
2825 Male, age 18, unknown 28.7
2316 Male, age 76, right hemisphere 28.4
Red nucleus
nTPM: 30.5
2503 Female, age 72, unknown 32.3
2785 Male, age 18, unknown 31.5
1904 Male, age 53, unknown 31.1
1954 Female, age 42, unknown 31.1
1821 Female, age 72, unknown 30.9
2227 Male, age 72, unknown 30.8
2769 Male, age 72, unknown 30.7
1865 Male, age 51, unknown 30.4
2725 Female, age 75, unknown 29.8
2588 Male, age 74, left hemisphere 29.6
2584 Male, age 75, left hemisphere 28.6
2823 Male, age 76, right hemisphere 28.6
Substantia nigra
nTPM: 30.4
1916 Female, age 42, unknown 32.7
1851 Male, age 51, unknown 32.6
1889 Female, age 72, unknown 31.6
2241 Male, age 72, unknown 30.2
2590 Female, age 75, unknown 29.9
1941 Male, age 53, unknown 29.6
2409 Female, age 72, unknown 29.6
2699 Male, age 18, unknown 29.6
2665 Male, age 74, both hemispheres 29.5
2583 Male, age 75, right hemisphere 29.2
Superior colliculus
nTPM: 30.2
1796 Male, age 53, unknown 32.4
2087 Female, age 72, unknown 31.7
2261 Male, age 18, unknown 31.3
2668 Female, age 75, unknown 30.9
1913 Female, age 42, unknown 30.0
1839 Male, age 51, unknown 29.6
1895 Male, age 76, right hemisphere 29.3
2664 Male, age 75, both hemispheres 29.3
1995 Male, age 72, unknown 28.9
2587 Male, age 74, left hemisphere 28.4
Ventral tegmental area
nTPM: 30.1
2410 Female, age 72, unknown 31.3
1915 Female, age 42, unknown 31.1
2218 Male, age 76, both hemispheres 31.1
2223 Female, age 72, unknown 29.6
1942 Male, age 51, unknown 29.0
2021 Male, age 53, unknown 28.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 29.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 29.4
Samples: 139

Max nTPM: 59.8
Min nTPM: 19.2
Std nTPM: 5.6
Median nTPM: 28.4
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 59.8
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 51.8
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 45.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 42.0
GTEX-1IY9M-0011-R2a-SM-D4P29 60-69 years, male 40.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 37.7
GTEX-13O3O-0011-R2b-SM-5P9H1 60-69 years, female 37.0
GTEX-1E1VI-0011-R2a-SM-9QEGS 50-59 years, male 37.0
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 36.8
GTEX-147GR-0011-R2b-SM-5S2RQ 60-69 years, male 36.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT 60-69 years, male 36.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 16.9
FF:10158-103A5 76 years, female 16.9

MIDBRAIN - Pig RNA-seqi
Average nTPM 14.1
Pig sample Sample description nTPM
Midbrain
nTPM: 14.1
Samples: 4

Max nTPM: 17.7
Min nTPM: 11.4
Sample A Female 17.7
Sample B Female 11.4
Sample C Male 14.9
Sample D Male 12.2
Periaqueductal gray
nTPM: 10.2
Samples: 3

Max nTPM: 10.8
Min nTPM: 9.1
Sample B Female 10.7
Sample C Male 10.8
Sample D Male 9.1
Substantia nigra
nTPM: 12.8
Samples: 4

Max nTPM: 15.1
Min nTPM: 10.7
Sample A Female 15.1
Sample B Female 10.7
Sample C Male 12.9
Sample D Male 12.3
Superior colliculi
nTPM: 14.0
Samples: 4

Max nTPM: 16.1
Min nTPM: 12.2
Sample A Female 16.1
Sample B Female 13.2
Sample C Male 14.6
Sample D Male 12.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 20.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 20.2
Samples: 4

Max nTPM: 21.1
Min nTPM: 19.1
Sample A Male 20.8
Sample B Male 19.1
Sample C Female 21.1
Sample D Female 19.9

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 7.0
68745426 Antisense, RP_050210_01_H09, Mouse strain C57BL/6J (56 days, male) 7.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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