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NDUFV2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:104.4 nTPM
HPA:104.4 nTPM
GTEx:128.2 nTPM
FANTOM5:81.5 Scaled Tags Per Million
Pig:144.1 nTPM
Mouse:291.0 nTPM
Allen mouse:12.9 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 104.4
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 93.5
2019 Male, age 18, unknown 106.1
2411 Female, age 72, unknown 100.0
1827 Male, age 72, unknown 95.2
2219 Male, age 76, both hemispheres 95.1
1870 Female, age 42, unknown 93.2
1830 Male, age 51, unknown 92.6
1833 Male, age 53, unknown 91.5
2828 Female, age 72, unknown 89.6
2666 Male, age 74, left hemisphere 87.4
2586 Male, age 75, left hemisphere 84.6
Dorsal raphe nucleus
nTPM: 95.3
2298 Female, age 72, unknown 101.1
1828 Male, age 53, unknown 97.9
2750 Male, age 76, both hemispheres 93.6
2047 Male, age 72, unknown 93.4
2016 Female, age 72, unknown 90.5
Inferior colliculus
nTPM: 96.7
2097 Female, age 72, unknown 104.1
1890 Male, age 53, unknown 97.7
1848 Female, age 42, unknown 94.6
2849 Male, age 72, unknown 90.5
Median raphe nucleus
nTPM: 93.5
2220 Male, age 76, midline 93.5
Pedunculopontine tegmental nucleus
nTPM: 96.8
2334 Male, age 80, both hemispheres 99.0
1921 Female, age 85, both hemispheres 97.1
2338 Male, age 61, both hemispheres 94.5
Periaquaductal grey, anterior
nTPM: 94.1
1947 Male, age 18, unknown 96.2
2502 Female, age 75, unknown 94.2
1795 Male, age 51, unknown 92.0
Periaquaductal grey, dorsal
nTPM: 89.6
2464 Female, age 72, unknown 91.3
1840 Male, age 53, unknown 90.0
2850 Male, age 76, both hemispheres 89.1
1831 Male, age 72, unknown 88.1
Periaquaductal grey, lateral
nTPM: 90.8
2272 Male, age 74, both hemispheres 96.5
2053 Male, age 18, unknown 88.7
2140 Male, age 76, both hemispheres 87.1
Pretectal area
nTPM: 97.2
2007 Male, age 72, unknown 105.9
1944 Female, age 72, unknown 105.3
1817 Female, age 42, unknown 103.0
2667 Female, age 75, unknown 101.0
1816 Male, age 51, unknown 100.8
1815 Male, age 53, unknown 97.6
2273 Male, age 74, both hemispheres 96.1
2224 Female, age 72, unknown 94.5
2316 Male, age 76, right hemisphere 90.0
2825 Male, age 18, unknown 87.7
2407 Male, age 75, both hemispheres 87.0
Red nucleus
nTPM: 94.0
1821 Female, age 72, unknown 102.0
2785 Male, age 18, unknown 98.9
2725 Female, age 75, unknown 96.1
2823 Male, age 76, right hemisphere 94.3
1865 Male, age 51, unknown 93.6
1954 Female, age 42, unknown 93.6
1904 Male, age 53, unknown 93.3
2503 Female, age 72, unknown 93.3
2769 Male, age 72, unknown 92.0
2227 Male, age 72, unknown 91.7
2584 Male, age 75, left hemisphere 89.7
2588 Male, age 74, left hemisphere 89.1
Substantia nigra
nTPM: 104.4
2241 Male, age 72, unknown 117.0
1916 Female, age 42, unknown 115.8
1889 Female, age 72, unknown 108.7
1941 Male, age 53, unknown 108.1
1851 Male, age 51, unknown 107.2
2409 Female, age 72, unknown 107.2
2665 Male, age 74, both hemispheres 96.0
2699 Male, age 18, unknown 95.8
2590 Female, age 75, unknown 95.3
2583 Male, age 75, right hemisphere 93.3
Superior colliculus
nTPM: 92.6
2087 Female, age 72, unknown 99.6
1895 Male, age 76, right hemisphere 97.3
2587 Male, age 74, left hemisphere 96.1
1796 Male, age 53, unknown 93.1
2668 Female, age 75, unknown 93.0
2261 Male, age 18, unknown 92.4
1839 Male, age 51, unknown 91.6
1913 Female, age 42, unknown 89.8
1995 Male, age 72, unknown 87.9
2664 Male, age 75, both hemispheres 84.9
Ventral tegmental area
nTPM: 98.2
2410 Female, age 72, unknown 108.5
1915 Female, age 42, unknown 102.1
2218 Male, age 76, both hemispheres 100.6
1942 Male, age 51, unknown 94.6
2223 Female, age 72, unknown 93.1
2021 Male, age 53, unknown 90.4

MIDBRAIN - GTEx RNA-seqi
Average nTPM 128.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 128.2
Samples: 139

Max nTPM: 268.1
Min nTPM: 71.6
Std nTPM: 33.6
Median nTPM: 123.3
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 268.1
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 223.8
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 222.1
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 215.6
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 215.1
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 208.2
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 196.5
GTEX-1LH75-0011-R2b-SM-EYYWQ 50-59 years, female 190.5
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 188.6
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 184.4
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 182.0
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 81.5
FF:10158-103A5 76 years, female 81.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 144.1
Pig sample Sample description nTPM
Midbrain
nTPM: 133.5
Samples: 4

Max nTPM: 149.6
Min nTPM: 122.5
Sample A Female 149.6
Sample B Female 136.8
Sample C Male 125.2
Sample D Male 122.5
Periaqueductal gray
nTPM: 106.6
Samples: 3

Max nTPM: 113.2
Min nTPM: 96.8
Sample B Female 109.9
Sample C Male 113.2
Sample D Male 96.8
Substantia nigra
nTPM: 121.7
Samples: 4

Max nTPM: 157.9
Min nTPM: 104.5
Sample A Female 157.9
Sample B Female 104.5
Sample C Male 118.2
Sample D Male 106.3
Superior colliculi
nTPM: 144.1
Samples: 4

Max nTPM: 165.1
Min nTPM: 110.5
Sample A Female 162.9
Sample B Female 110.5
Sample C Male 165.1
Sample D Male 137.8

MIDBRAIN - Mouse RNA-seqi
Average nTPM 291.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 291.0
Samples: 4

Max nTPM: 298.8
Min nTPM: 282.5
Sample A Male 292.2
Sample B Male 298.8
Sample C Female 282.5
Sample D Female 290.4

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 12.9
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 12.9
77371763 Antisense, RP_070116_01_D05, Mouse strain C57BL/6J (56 days, male) 18.1
68080679 Antisense, RP_040929_01_D09, Mouse strain C57BL/6J (56 days, male) 12.6
71213788 Antisense, RP_050816_04_F06, Mouse strain C57BL/6J (56 days, male) 7.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.