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GALNT11
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:39.1 nTPM
HPA:39.1 nTPM
GTEx:28.3 nTPM
FANTOM5:69.0 Scaled Tags Per Million
Pig:46.0 nTPM
Mouse:31.4 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039330
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.1
Sample id Sample description nTPM
Hippocampus
nTPM: 19.5
1898 Male, age 80, left hemisphere 23.4
2621 Female, age 67, right hemisphere 20.9
1855 Male, age 76, left hemisphere 19.8
2148 Female, age 91, left hemisphere 18.6
2529 Female, age 94, left hemisphere 17.7
1911 Female, age 85, right hemisphere 16.8
Dentate gyrus
nTPM: 21.9
1927 Female, age 91, both hemispheres 26.8
2010 Male, age 76, both hemispheres 25.9
2246 Female, age 85, both hemispheres 25.1
2531 Female, age 67, both hemispheres 21.3
2528 Male, age 74, both hemispheres 17.8
2530 Female, age 94, left hemisphere 14.3
Entorhinal gyrus
nTPM: 24.5
2613 Female, age 94, left hemisphere 29.8
1938 Female, age 85, left hemisphere 28.5
1787 Male, age 76, left hemisphere 25.1
2764 Male, age 80, right hemisphere 23.4
2686 Male, age 75, right hemisphere 20.2
2117 Female, age 91, right hemisphere 20.1
Hippocampus, CA1
nTPM: 27.2
2749 Male, age 80, left hemisphere 40.6
2045 Male, age 76, both hemispheres 30.1
2527 Male, age 74, both hemispheres 23.9
1873 Female, age 85, both hemispheres 22.2
2082 Female, age 91, right hemisphere 19.0
Hippocampus, CA2
nTPM: 24.1
2249 Male, age 74, both hemispheres 36.5
1892 Male, age 76, both hemispheres 29.4
2437 Female, age 94, left hemisphere 21.5
1963 Male, age 80, left hemisphere 20.4
1940 Female, age 85, left hemisphere 19.2
2113 Female, age 91, right hemisphere 17.9
Hippocampus, CA3
nTPM: 39.1
2436 Male, age 74, both hemispheres 109.5
2137 Male, age 80, left hemisphere 37.5
1867 Male, age 76, both hemispheres 25.8
2620 Female, age 94, left hemisphere 22.6
2861 Female, age 67, both hemispheres 20.2
1891 Female, age 85, both hemispheres 18.9
Parahippocampal cortex
nTPM: 25.5
2693 Female, age 94, both hemispheres 31.4
1850 Male, age 80, both hemispheres 31.3
1933 Female, age 85, both hemispheres 28.5
2245 Female, age 91, both hemispheres 25.7
2018 Male, age 76, both hemispheres 24.2
1990 Female, age 91, right hemisphere 23.9
2532 Female, age 72, left hemisphere 23.9
2250 Female, age 67, right hemisphere 23.7
2692 Male, age 74, both hemispheres 21.5
2622 Female, age 67, right hemisphere 21.4
Perirhinal gyrus
nTPM: 32.1
2521 Female, age 94, right hemisphere 35.7
1847 Female, age 91, left hemisphere 35.2
1794 Male, age 80, right hemisphere 32.9
1841 Female, age 85, right hemisphere 29.3
2848 Male, age 76, right hemisphere 27.5
Subiculum
nTPM: 21.3
2438 Female, age 94, left hemisphere 26.3
1977 Female, age 85, both hemispheres 23.4
1901 Male, age 80, both hemispheres 22.6
2619 Male, age 74, both hemispheres 19.5
2042 Male, age 76, both hemispheres 19.1
2729 Female, age 91, right hemisphere 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.3
Samples: 197

Max nTPM: 54.6
Min nTPM: 11.6
Std nTPM: 9.3
Median nTPM: 27.3
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 54.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 54.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 51.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 49.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 49.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 49.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 48.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 46.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 46.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 45.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 45.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.0
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 54.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.7
Samples: 4

Max nTPM: 46.8
Min nTPM: 39.7
Sample A Female 46.6
Sample B Female 46.8
Sample C Male 45.5
Sample D Male 39.7
Entorhinal cortex
nTPM: 46.0
Samples: 4

Max nTPM: 56.0
Min nTPM: 40.9
Sample A Female 41.1
Sample B Female 56.0
Sample C Male 45.8
Sample D Male 40.9
Subiculum
nTPM: 42.6
Samples: 4

Max nTPM: 52.9
Min nTPM: 36.5
Sample A Female 52.9
Sample B Female 41.2
Sample C Male 39.9
Sample D Male 36.5
Ventral hippocampus
nTPM: 43.4
Samples: 4

Max nTPM: 46.2
Min nTPM: 40.5
Sample A Female 40.5
Sample B Female 41.6
Sample C Male 46.2
Sample D Male 45.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 30.9
Min nTPM: 27.4
Sample A Male 29.4
Sample B Male 29.9
Sample C Female 30.9
Sample D Female 27.4
Hippocampal formation
nTPM: 31.4
Samples: 4

Max nTPM: 36.7
Min nTPM: 27.7
Sample A Male 27.7
Sample B Male 29.8
Sample C Female 36.7
Sample D Female 31.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
68301506 Antisense, RP_041130_01_D04, Mouse strain C57BL/6J (56 days, male) 3.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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