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EPM2AIP1
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.0 nTPM
HPA:11.0 nTPM
GTEx:9.4 nTPM
FANTOM5:61.8 Scaled Tags Per Million
Pig:35.9 nTPM
Mouse:68.8 nTPM
Allen mouse:5.9 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 11.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 8.5
2288 Male, age 75, left hemisphere 10.3
1781 Male, age 74, unknown 9.3
2481 Female, age 94, left hemisphere 9.0
2846 Female, age 79, unknown 9.0
2290 Female, age 72, unknown 7.9
1857 Female, age 85, left hemisphere 7.6
1854 Male, age 80, left hemisphere 7.4
2289 Male, age 61, right hemisphere 7.2
Claustrum
nTPM: 9.4
2392 Female, age 94, both hemispheres 11.7
2491 Male, age 75, both hemispheres 10.8
1956 Male, age 74, unknown 10.7
2196 Female, age 79, unknown 9.9
2284 Female, age 91, both hemispheres 9.7
2292 Female, age 85, both hemispheres 8.8
2198 Male, age 80, both hemispheres 8.3
2568 Male, age 61, both hemispheres 7.9
2645 Female, age 72, unknown 7.0
Globus pallidus, externus
nTPM: 7.4
2395 Male, age 75, both hemispheres 9.8
2772 Female, age 79, unknown 8.6
1996 Male, age 80, right hemisphere 6.7
2567 Female, age 72, unknown 6.6
2646 Male, age 61, right hemisphere 5.4
Globus pallidus, internus
nTPM: 8.8
2287 Male, age 75, right hemisphere 12.7
2778 Female, age 91, both hemispheres 10.7
2111 Female, age 85, right hemisphere 8.3
1818 Male, age 74, unknown 8.1
2566 Female, age 72, unknown 7.5
2483 Female, age 94, right hemisphere 7.4
2037 Male, age 80, right hemisphere 7.2
Nucleus accumbens
nTPM: 9.7
2391 Female, age 94, left hemisphere 12.5
1856 Female, age 91, right hemisphere 11.1
2824 Male, age 61, right hemisphere 10.0
2286 Male, age 75, left hemisphere 9.9
1806 Female, age 85, left hemisphere 8.6
2698 Female, age 72, unknown 8.5
1783 Male, age 74, unknown 8.4
2732 Male, age 80, right hemisphere 8.2
Nucleus basalis of Meynert
nTPM: 7.0
2393 Male, age 80, right hemisphere 8.2
2484 Female, age 94, left hemisphere 7.9
2821 Male, age 75, both hemispheres 7.5
2569 Male, age 61, both hemispheres 4.3
Nucleus of the diagonal band
nTPM: 11.0
2775 Male, age 80, right hemisphere 12.1
2029 Male, age 61, right hemisphere 11.3
1812 Female, age 91, both hemispheres 11.1
2195 Female, age 85, both hemispheres 10.6
1979 Male, age 74, unknown 10.0
Olfactory tubercle
nTPM: 10.6
1998 Female, age 91, both hemispheres 10.9
2487 Female, age 94, left hemisphere 10.5
1846 Male, age 80, right hemisphere 10.4
2856 Male, age 75, right hemisphere 10.4
Putamen
nTPM: 8.3
1937 Female, age 91, right hemisphere 11.2
1838 Male, age 80, right hemisphere 9.5
2482 Female, age 94, left hemisphere 8.6
2466 Female, age 79, unknown 8.5
1829 Male, age 74, unknown 7.8
2647 Male, age 75, left hemisphere 6.2
2489 Female, age 72, unknown 5.9
Septal nuclei
nTPM: 10.5
2031 Female, age 72, unknown 12.6
2629 Female, age 94, right hemisphere 12.6
1960 Male, age 74, unknown 11.6
2009 Female, age 91, both hemispheres 10.8
2394 Male, age 61, left hemisphere 9.7
2199 Male, age 80, right hemisphere 8.1
2059 Female, age 85, both hemispheres 7.9

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 9.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 8.8
Samples: 246

Max nTPM: 16.5
Min nTPM: 4.8
Std nTPM: 1.7
Median nTPM: 8.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 16.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 14.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 14.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 12.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 12.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 12.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 12.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 12.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 12.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 11.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 11.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 9.4
Samples: 246

Max nTPM: 22.4
Min nTPM: 4.3
Std nTPM: 2.2
Median nTPM: 9.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 22.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 14.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 14.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 13.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 13.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 13.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 13.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 12.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 12.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 12.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 12.8
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Brain - Putamen (basal ganglia)
Average nTPM: 8.0
Samples: 205

Max nTPM: 13.4
Min nTPM: 3.7
Std nTPM: 1.7
Median nTPM: 7.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 13.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 13.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 12.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 11.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 11.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 11.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 11.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 10.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 10.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 10.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 10.7
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 48.7
FF:10164-103B2 76 years, female 48.7
Globus pallidus
Scaled Tags Per Million: 39.7
FF:10161-103A8 76 years, female 48.7
FF:10175-103C4 60 years, female 30.7
Nucleus accumbens
Scaled Tags Per Million: 57.4
FF:10037-101F1 23-56 years, mixed 57.4
Putamen
Scaled Tags Per Million: 61.8
FF:10176-103C5 60 years, female 61.8

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 35.9
Pig sample Sample description nTPM
Caudate
nTPM: 23.9
Samples: 4

Max nTPM: 26.1
Min nTPM: 22.2
Sample A Female 26.1
Sample B Female 22.2
Sample C Male 24.4
Sample D Male 23.0
Putamen
nTPM: 25.8
Samples: 4

Max nTPM: 30.1
Min nTPM: 21.9
Sample A Female 24.9
Sample B Female 21.9
Sample C Male 30.1
Sample D Male 26.2
Septum
nTPM: 35.9
Samples: 4

Max nTPM: 50.9
Min nTPM: 25.2
Sample A Female 35.3
Sample B Female 32.1
Sample C Male 50.9
Sample D Male 25.2
Ventral pallidum
nTPM: 31.5
Samples: 4

Max nTPM: 37.5
Min nTPM: 28.2
Sample A Female 31.1
Sample B Female 28.2
Sample C Male 37.5
Sample D Male 29.1

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 68.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 42.9
Samples: 4

Max nTPM: 44.0
Min nTPM: 40.5
Sample A Male 43.5
Sample B Male 40.5
Sample C Female 44.0
Sample D Female 43.7
Septum
nTPM: 68.8
Samples: 4

Max nTPM: 73.0
Min nTPM: 66.3
Sample A Male 73.0
Sample B Male 66.3
Sample C Female 69.0
Sample D Female 66.9
Ventral forebrain
nTPM: 53.1
Samples: 4

Max nTPM: 61.2
Min nTPM: 48.8
Sample A Male 48.8
Sample B Male 61.2
Sample C Female 51.4
Sample D Female 50.8

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.3
583840 Antisense, RP_040831_01_A01, Mouse strain C57BL/6J (56 days, male) 3.3
Pallidum
Expression energy: 5.9
583840 Antisense, RP_040831_01_A01, Mouse strain C57BL/6J (56 days, male) 5.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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