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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:158.9 nTPM
HPA:158.9 nTPM
GTEx:214.2 nTPM
FANTOM5:631.2 Scaled Tags Per Million
Pig:208.5 nTPM
Mouse:368.9 nTPM
Allen mouse:14.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036980Antibody HPA036981
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 158.9
Sample id Sample description nTPM
Hippocampus
nTPM: 153.0
1898 Male, age 80, left hemisphere 164.0
2621 Female, age 67, right hemisphere 162.1
1855 Male, age 76, left hemisphere 152.9
2148 Female, age 91, left hemisphere 151.2
2529 Female, age 94, left hemisphere 148.9
1911 Female, age 85, right hemisphere 139.0
Dentate gyrus
nTPM: 147.2
2530 Female, age 94, left hemisphere 164.1
1927 Female, age 91, both hemispheres 155.7
2528 Male, age 74, both hemispheres 146.5
2246 Female, age 85, both hemispheres 145.7
2010 Male, age 76, both hemispheres 140.6
2531 Female, age 67, both hemispheres 130.6
Entorhinal gyrus
nTPM: 143.9
2613 Female, age 94, left hemisphere 152.8
2764 Male, age 80, right hemisphere 152.3
1938 Female, age 85, left hemisphere 144.7
2117 Female, age 91, right hemisphere 141.1
1787 Male, age 76, left hemisphere 140.6
2686 Male, age 75, right hemisphere 131.9
Hippocampus, CA1
nTPM: 158.9
2749 Male, age 80, left hemisphere 218.5
1873 Female, age 85, both hemispheres 162.5
2527 Male, age 74, both hemispheres 152.7
2045 Male, age 76, both hemispheres 135.9
2082 Female, age 91, right hemisphere 125.0
Hippocampus, CA2
nTPM: 140.6
1892 Male, age 76, both hemispheres 157.8
1963 Male, age 80, left hemisphere 151.5
2113 Female, age 91, right hemisphere 137.9
2437 Female, age 94, left hemisphere 134.2
2249 Male, age 74, both hemispheres 132.9
1940 Female, age 85, left hemisphere 129.2
Hippocampus, CA3
nTPM: 157.6
2137 Male, age 80, left hemisphere 203.5
2620 Female, age 94, left hemisphere 172.9
2861 Female, age 67, both hemispheres 158.4
1867 Male, age 76, both hemispheres 146.7
1891 Female, age 85, both hemispheres 133.4
2436 Male, age 74, both hemispheres 130.5
Parahippocampal cortex
nTPM: 139.5
2245 Female, age 91, both hemispheres 164.1
1850 Male, age 80, both hemispheres 147.2
2622 Female, age 67, right hemisphere 141.7
1933 Female, age 85, both hemispheres 139.7
2532 Female, age 72, left hemisphere 137.3
2692 Male, age 74, both hemispheres 137.0
1990 Female, age 91, right hemisphere 136.7
2693 Female, age 94, both hemispheres 134.1
2250 Female, age 67, right hemisphere 132.8
2018 Male, age 76, both hemispheres 124.4
Perirhinal gyrus
nTPM: 145.8
1794 Male, age 80, right hemisphere 164.6
1847 Female, age 91, left hemisphere 154.5
1841 Female, age 85, right hemisphere 147.2
2521 Female, age 94, right hemisphere 134.8
2848 Male, age 76, right hemisphere 127.6
Subiculum
nTPM: 140.3
2619 Male, age 74, both hemispheres 154.9
1901 Male, age 80, both hemispheres 152.8
2438 Female, age 94, left hemisphere 141.0
1977 Female, age 85, both hemispheres 133.0
2042 Male, age 76, both hemispheres 131.5
2729 Female, age 91, right hemisphere 128.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 214.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 214.2
Samples: 197

Max nTPM: 410.4
Min nTPM: 74.4
Std nTPM: 65.3
Median nTPM: 205.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 410.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 380.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 375.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 371.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 365.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 363.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 358.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 356.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 338.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 337.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 337.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 631.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 631.2
FF:10169-103B7 60 years, female 877.8
FF:10153-102I9 76 years, female 384.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 208.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 208.5
Samples: 4

Max nTPM: 285.9
Min nTPM: 158.2
Sample A Female 285.9
Sample B Female 226.6
Sample C Male 163.4
Sample D Male 158.2
Entorhinal cortex
nTPM: 143.5
Samples: 4

Max nTPM: 169.6
Min nTPM: 119.7
Sample A Female 169.6
Sample B Female 119.7
Sample C Male 153.3
Sample D Male 131.5
Subiculum
nTPM: 151.8
Samples: 4

Max nTPM: 198.5
Min nTPM: 125.7
Sample A Female 198.5
Sample B Female 127.4
Sample C Male 155.4
Sample D Male 125.7
Ventral hippocampus
nTPM: 185.3
Samples: 4

Max nTPM: 254.8
Min nTPM: 106.2
Sample A Female 170.2
Sample B Female 106.2
Sample C Male 210.0
Sample D Male 254.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 368.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 278.9
Samples: 4

Max nTPM: 322.6
Min nTPM: 248.4
Sample A Male 264.6
Sample B Male 248.4
Sample C Female 280.1
Sample D Female 322.6
Hippocampal formation
nTPM: 368.9
Samples: 4

Max nTPM: 418.2
Min nTPM: 316.5
Sample A Male 316.5
Sample B Male 384.6
Sample C Female 418.2
Sample D Female 356.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.0
68162255 Antisense, RP_041122_02_E12, Mouse strain C57BL/6J (56 days, male) 26.2
1948 Antisense, RP_040507_01_F08, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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