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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:70.7 nTPM
HPA:70.7 nTPM
GTEx:72.7 nTPM
FANTOM5:430.1 Scaled Tags Per Million
Pig:101.8 nTPM
Mouse:351.3 nTPM
Allen mouse:23.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.7
Sample id Sample description nTPM
Hippocampus
nTPM: 58.5
1898 Male, age 80, left hemisphere 78.8
2621 Female, age 67, right hemisphere 60.6
1855 Male, age 76, left hemisphere 60.2
2529 Female, age 94, left hemisphere 54.3
2148 Female, age 91, left hemisphere 53.2
1911 Female, age 85, right hemisphere 44.0
Dentate gyrus
nTPM: 59.9
1927 Female, age 91, both hemispheres 69.4
2530 Female, age 94, left hemisphere 67.7
2010 Male, age 76, both hemispheres 61.3
2246 Female, age 85, both hemispheres 60.5
2528 Male, age 74, both hemispheres 58.5
2531 Female, age 67, both hemispheres 42.2
Entorhinal gyrus
nTPM: 59.0
1938 Female, age 85, left hemisphere 70.1
2613 Female, age 94, left hemisphere 70.0
2764 Male, age 80, right hemisphere 69.7
1787 Male, age 76, left hemisphere 55.9
2117 Female, age 91, right hemisphere 47.5
2686 Male, age 75, right hemisphere 40.8
Hippocampus, CA1
nTPM: 70.7
2749 Male, age 80, left hemisphere 115.1
1873 Female, age 85, both hemispheres 70.6
2527 Male, age 74, both hemispheres 63.3
2045 Male, age 76, both hemispheres 57.4
2082 Female, age 91, right hemisphere 47.1
Hippocampus, CA2
nTPM: 59.1
1892 Male, age 76, both hemispheres 74.2
1963 Male, age 80, left hemisphere 71.2
2249 Male, age 74, both hemispheres 62.1
2437 Female, age 94, left hemisphere 58.9
2113 Female, age 91, right hemisphere 46.7
1940 Female, age 85, left hemisphere 41.5
Hippocampus, CA3
nTPM: 64.4
2436 Male, age 74, both hemispheres 89.3
2137 Male, age 80, left hemisphere 73.5
2620 Female, age 94, left hemisphere 70.0
1867 Male, age 76, both hemispheres 57.5
2861 Female, age 67, both hemispheres 49.4
1891 Female, age 85, both hemispheres 46.6
Parahippocampal cortex
nTPM: 54.6
2245 Female, age 91, both hemispheres 66.5
1850 Male, age 80, both hemispheres 65.7
1933 Female, age 85, both hemispheres 64.1
2250 Female, age 67, right hemisphere 60.0
1990 Female, age 91, right hemisphere 58.0
2693 Female, age 94, both hemispheres 52.3
2532 Female, age 72, left hemisphere 48.0
2692 Male, age 74, both hemispheres 45.4
2018 Male, age 76, both hemispheres 43.4
2622 Female, age 67, right hemisphere 42.5
Perirhinal gyrus
nTPM: 70.1
1847 Female, age 91, left hemisphere 87.7
1794 Male, age 80, right hemisphere 75.0
2521 Female, age 94, right hemisphere 73.5
1841 Female, age 85, right hemisphere 63.2
2848 Male, age 76, right hemisphere 51.2
Subiculum
nTPM: 50.8
1977 Female, age 85, both hemispheres 58.6
2438 Female, age 94, left hemisphere 57.0
2619 Male, age 74, both hemispheres 55.5
1901 Male, age 80, both hemispheres 54.7
2729 Female, age 91, right hemisphere 41.1
2042 Male, age 76, both hemispheres 37.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.7
Samples: 197

Max nTPM: 174.1
Min nTPM: 18.5
Std nTPM: 31.4
Median nTPM: 66.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 174.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 163.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 158.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 145.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 145.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 143.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 143.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 142.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 139.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 136.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 136.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 430.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 430.1
FF:10169-103B7 60 years, female 575.4
FF:10153-102I9 76 years, female 284.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 101.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 88.8
Samples: 4

Max nTPM: 116.3
Min nTPM: 65.0
Sample A Female 116.3
Sample B Female 100.1
Sample C Male 73.7
Sample D Male 65.0
Entorhinal cortex
nTPM: 67.9
Samples: 4

Max nTPM: 89.5
Min nTPM: 55.7
Sample A Female 89.5
Sample B Female 61.6
Sample C Male 64.9
Sample D Male 55.7
Subiculum
nTPM: 85.7
Samples: 4

Max nTPM: 106.7
Min nTPM: 73.8
Sample A Female 106.7
Sample B Female 75.5
Sample C Male 86.9
Sample D Male 73.8
Ventral hippocampus
nTPM: 101.9
Samples: 4

Max nTPM: 134.5
Min nTPM: 60.8
Sample A Female 114.0
Sample B Female 60.8
Sample C Male 134.5
Sample D Male 98.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 351.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 319.8
Samples: 4

Max nTPM: 348.1
Min nTPM: 298.5
Sample A Male 298.5
Sample B Male 305.9
Sample C Female 326.8
Sample D Female 348.1
Hippocampal formation
nTPM: 351.3
Samples: 4

Max nTPM: 361.8
Min nTPM: 339.0
Sample A Male 339.0
Sample B Male 348.4
Sample C Female 356.0
Sample D Female 361.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.8
69015619 Antisense, RP_050315_01_D02, Mouse strain C57BL/6J (56 days, male) 23.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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